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authorPaul-Christian Volkmer2025-06-26 01:08:30 +0200
committerGitHub2025-06-26 01:08:30 +0200
commit858189aa5941d29e4238ffb6b0baee21be11208e (patch)
tree3c2788c8c00af345e5864c8b31f571de2544d952
parent17f4dc3512c922091041beb7c7bb84d467253e7c (diff)
chore: data model changes (#117)
See: https://github.com/dnpm-dip/mtb-model/commit/3234082af1faf40d6b2faa67f8afcef95d2a5a3b
-rw-r--r--src/main/kotlin/dev/dnpm/etl/processor/pseudonym/extensions.kt1
-rw-r--r--src/test/kotlin/dev/dnpm/etl/processor/pseudonym/ExtensionsTest.kt2
-rw-r--r--src/test/resources/mv64e-mtb-fake-patient.json2018
3 files changed, 1022 insertions, 999 deletions
diff --git a/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/extensions.kt b/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/extensions.kt
index 7ce1e0c..8d5a2cc 100644
--- a/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/extensions.kt
+++ b/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/extensions.kt
@@ -255,6 +255,7 @@ infix fun Mtb.pseudonymizeWith(pseudonymizeService: PseudonymizeService) {
this.claims?.forEach { it.patient.id = patientPseudonym }
this.claimResponses?.forEach { it.patient.id = patientPseudonym }
this.diagnoses?.forEach { it.patient.id = patientPseudonym }
+ this.familyMemberHistories?.forEach { it.patient.id = patientPseudonym }
this.histologyReports?.forEach {
it.patient.id = patientPseudonym
it.results.tumorMorphology?.patient?.id = patientPseudonym
diff --git a/src/test/kotlin/dev/dnpm/etl/processor/pseudonym/ExtensionsTest.kt b/src/test/kotlin/dev/dnpm/etl/processor/pseudonym/ExtensionsTest.kt
index e30ee73..65986f1 100644
--- a/src/test/kotlin/dev/dnpm/etl/processor/pseudonym/ExtensionsTest.kt
+++ b/src/test/kotlin/dev/dnpm/etl/processor/pseudonym/ExtensionsTest.kt
@@ -207,7 +207,7 @@ class ExtensionsTest {
inner class UsingDnpmV2Datamodel {
val FAKE_MTB_FILE_PATH = "mv64e-mtb-fake-patient.json"
- val CLEAN_PATIENT_ID = "e14bf9b6-7982-4933-a648-cfdea6484f1c"
+ val CLEAN_PATIENT_ID = "aca5a971-28be-4089-8128-0036a4fe6f1a"
private fun fakeMtbFile(): Mtb {
val mtbFile = ClassPathResource(FAKE_MTB_FILE_PATH).inputStream
diff --git a/src/test/resources/mv64e-mtb-fake-patient.json b/src/test/resources/mv64e-mtb-fake-patient.json
index 5895be5..291f22d 100644
--- a/src/test/resources/mv64e-mtb-fake-patient.json
+++ b/src/test/resources/mv64e-mtb-fake-patient.json
@@ -1,12 +1,12 @@
{
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"gender": {
"code": "male",
"display": "Männlich",
"system": "Gender"
},
- "birthDate": "1993-08-01",
+ "birthDate": "1961-09-01",
"healthInsurance": {
"type": {
"code": "GKV",
@@ -24,7 +24,7 @@
"municipalityCode": "12345"
},
"age": {
- "value": 31,
+ "value": 63,
"unit": "Years"
},
"vitalStatus": {
@@ -35,17 +35,17 @@
},
"episodesOfCare": [
{
- "id": "dc4d1b2c-7468-4a4a-8fbd-1b0bb645c082",
+ "id": "5481850f-f266-4d2f-8fbc-6bb790680d8f",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"period": {
- "start": "2024-11-30"
+ "start": "2024-12-24"
},
"diagnoses": [
{
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
"type": "MTBDiagnosis"
}
]
@@ -53,12 +53,12 @@
],
"diagnoses": [
{
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
- "recordedOn": "2022-09-01",
+ "recordedOn": "2023-03-01",
"type": {
"history": [
{
@@ -67,35 +67,35 @@
"display": "Hauptdiagnose",
"system": "dnpm-dip/mtb/diagnosis/type"
},
- "date": "2022-09-01"
+ "date": "2023-03-01"
}
]
},
"code": {
- "code": "C57.0",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "code": "C50.1",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"system": "http://fhir.de/CodeSystem/bfarm/icd-10-gm",
"version": "2025"
},
"topography": {
- "code": "C57.0",
- "display": "Eileiter",
+ "code": "C50.1",
+ "display": "Zentraler Drüsenkörper der Brust",
"system": "urn:oid:2.16.840.1.113883.6.43.1",
"version": "Zweite Revision"
},
"grading": {
"history": [
{
- "date": "2022-09-01",
+ "date": "2023-03-01",
"codes": [
{
- "code": "4",
- "display": "4 = undifferenziert",
+ "code": "U",
+ "display": "U = unbekannt",
"system": "https://www.basisdatensatz.de/feld/161/grading"
},
{
- "code": "1",
- "display": "Pilocytic astrocytoma",
+ "code": "2",
+ "display": "Diffuse astrocytoma",
"system": "dnpm-dip/mtb/who-grading-cns-tumors",
"version": "2021"
}
@@ -106,7 +106,7 @@
"staging": {
"history": [
{
- "date": "2022-09-01",
+ "date": "2023-03-01",
"method": {
"code": "clinical",
"display": "Klinisch",
@@ -118,18 +118,18 @@
"system": "UICC"
},
"nodes": {
- "code": "N3",
+ "code": "N2",
"system": "UICC"
},
"metastasis": {
- "code": "M0",
+ "code": "Mx",
"system": "UICC"
}
},
"otherClassifications": [
{
- "code": "local",
- "display": "Lokal",
+ "code": "unknown",
+ "display": "Unbekannt",
"system": "dnpm-dip/mtb/diagnosis/kds-tumor-spread"
}
]
@@ -137,8 +137,8 @@
]
},
"guidelineTreatmentStatus": {
- "code": "no-guidelines-available",
- "display": "Keine Leitlinien vorhanden",
+ "code": "unknown",
+ "display": "Unbekannt",
"system": "dnpm-dip/mtb/diagnosis/guideline-treatment-status"
},
"notes": [
@@ -146,30 +146,44 @@
]
}
],
+ "familyMemberHistories": [
+ {
+ "id": "f982b161-f8a3-4b5b-a390-1ef0d84efc1b",
+ "patient": {
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
+ "type": "Patient"
+ },
+ "relationship": {
+ "code": "EXT",
+ "display": "Verwandter weiteren Grades",
+ "system": "dnpm-dip/mtb/family-meber-history/relationship-type"
+ }
+ }
+ ],
"guidelineTherapies": [
{
- "id": "b63bcd3e-1bbb-425d-bd4f-03820036e249",
+ "id": "0c696b1a-d123-419b-9a6f-e79322392f4e",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
- "therapyLine": 8,
+ "therapyLine": 3,
"intent": {
"code": "X",
"display": "Keine Angabe",
"system": "dnpm-dip/therapy/intent"
},
"category": {
- "code": "S",
- "display": "Sonstiges",
+ "code": "I",
+ "display": "Intraopterativ",
"system": "dnpm-dip/therapy/category"
},
- "recordedOn": "2025-05-30",
+ "recordedOn": "2025-06-24",
"status": {
"code": "stopped",
"display": "Abgebrochen",
@@ -181,13 +195,13 @@
"system": "dnpm-dip/therapy/status-reason"
},
"period": {
- "start": "2024-05-30",
- "end": "2024-08-22"
+ "start": "2024-04-24",
+ "end": "2024-12-18"
},
"medication": [
{
- "code": "L01XX57",
- "display": "Plitidepsin",
+ "code": "L01EX02",
+ "display": "Sorafenib",
"system": "http://fhir.de/CodeSystem/bfarm/atc",
"version": "2025"
}
@@ -197,28 +211,28 @@
]
},
{
- "id": "d7de61c1-a5cc-429b-9c6f-e47765828f90",
+ "id": "da26f4c4-834e-4f6a-86eb-4df13c4a442f",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
- "therapyLine": 5,
+ "therapyLine": 4,
"intent": {
- "code": "P",
- "display": "Palliativ",
+ "code": "X",
+ "display": "Keine Angabe",
"system": "dnpm-dip/therapy/intent"
},
"category": {
- "code": "S",
- "display": "Sonstiges",
+ "code": "A",
+ "display": "Adjuvant",
"system": "dnpm-dip/therapy/category"
},
- "recordedOn": "2025-05-30",
+ "recordedOn": "2025-06-24",
"status": {
"code": "stopped",
"display": "Abgebrochen",
@@ -230,13 +244,13 @@
"system": "dnpm-dip/therapy/status-reason"
},
"period": {
- "start": "2024-02-29",
- "end": "2024-10-03"
+ "start": "2024-06-24",
+ "end": "2025-02-24"
},
"medication": [
{
- "code": "L01XX29",
- "display": "Denileukindiftitox",
+ "code": "L01EX13",
+ "display": "Gilteritinib",
"system": "http://fhir.de/CodeSystem/bfarm/atc",
"version": "2025"
}
@@ -248,14 +262,14 @@
],
"guidelineProcedures": [
{
- "id": "960c989f-12f0-4592-96a8-fcb55938cd38",
+ "id": "09ac6bfb-05bb-4c8f-b65a-dae96407939c",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
"therapyLine": 3,
@@ -265,23 +279,63 @@
"system": "dnpm-dip/therapy/intent"
},
"code": {
+ "code": "nuclear-medicine",
+ "display": "Nuklearmedizinische Therapie",
+ "system": "dnpm-dip/mtb/procedure/type"
+ },
+ "status": {
+ "code": "stopped",
+ "display": "Abgebrochen",
+ "system": "dnpm-dip/therapy/status"
+ },
+ "statusReason": {
+ "code": "patient-death",
+ "display": "Tod",
+ "system": "dnpm-dip/therapy/status-reason"
+ },
+ "recordedOn": "2025-06-24",
+ "period": {
+ "start": "2024-12-24"
+ },
+ "notes": [
+ "Notes on the therapeutic procedure..."
+ ]
+ },
+ {
+ "id": "1d12955f-216f-4731-8a37-e2eca4c2a735",
+ "patient": {
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
+ "type": "Patient"
+ },
+ "reason": {
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
+ "type": "MTBDiagnosis"
+ },
+ "therapyLine": 1,
+ "intent": {
+ "code": "S",
+ "display": "Sonstiges",
+ "system": "dnpm-dip/therapy/intent"
+ },
+ "code": {
"code": "surgery",
"display": "OP",
"system": "dnpm-dip/mtb/procedure/type"
},
"status": {
- "code": "on-going",
- "display": "Laufend",
+ "code": "completed",
+ "display": "Abgeschlossen",
"system": "dnpm-dip/therapy/status"
},
"statusReason": {
- "code": "payment-pending",
- "display": "Kostenübernahme noch ausstehend",
+ "code": "progression",
+ "display": "Progression",
"system": "dnpm-dip/therapy/status-reason"
},
- "recordedOn": "2025-05-30",
+ "recordedOn": "2025-06-24",
"period": {
- "start": "2024-11-30"
+ "start": "2024-12-24"
},
"notes": [
"Notes on the therapeutic procedure..."
@@ -290,28 +344,28 @@
],
"performanceStatus": [
{
- "id": "2d5108a3-600c-4153-8600-0427ad00d8a9",
+ "id": "7cf3d19b-a537-47e4-b7f0-d324e8b1ad70",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
- "effectiveDate": "2025-05-30",
+ "effectiveDate": "2025-06-24",
"value": {
- "code": "5",
- "display": "ECOG 5",
+ "code": "1",
+ "display": "ECOG 1",
"system": "ECOG-Performance-Status"
}
}
],
"specimens": [
{
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"diagnosis": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
"type": "MTBDiagnosis"
},
"type": {
@@ -320,15 +374,15 @@
"system": "dnpm-dip/mtb/tumor-specimen/type"
},
"collection": {
- "date": "2025-05-30",
+ "date": "2025-06-24",
"method": {
"code": "unknown",
"display": "Unbekannt",
"system": "dnpm-dip/mtb/tumor-specimen/collection/method"
},
"localization": {
- "code": "primary-tumor",
- "display": "Primärtumor",
+ "code": "unknown",
+ "display": "Unbekannt",
"system": "dnpm-dip/mtb/tumor-specimen/collection/localization"
}
}
@@ -336,9 +390,9 @@
],
"priorDiagnosticReports": [
{
- "id": "c02f0997-c43f-4da0-819e-d7ae7370d78d",
+ "id": "0209a1fa-3948-4bc5-a2f5-988818057544",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"performer": {
@@ -346,14 +400,14 @@
"display": "Molekular-Pathologie UKx",
"type": "Institute"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"specimen": {
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
"type": {
- "code": "karyotyping",
- "display": "Karyotyping",
+ "code": "fusion-panel",
+ "display": "Fusionspanel",
"system": "dnpm-dip/mtb/molecular-diagnostics/type"
},
"results": [
@@ -363,43 +417,43 @@
],
"histologyReports": [
{
- "id": "791de8a5-b766-42d5-9454-12fbfe25ad92",
+ "id": "1c51bb6f-b551-43a4-9923-6db7fe36440c",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"specimen": {
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"results": {
"tumorMorphology": {
- "id": "699db4c1-74a1-4c0f-bc20-275f85abfd20",
+ "id": "a177e88e-af76-45c8-ba93-e2f2339888a0",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"specimen": {
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
"value": {
- "code": "8891/0",
- "display": "Epitheloides Leiomyom",
+ "code": "9719/3",
+ "display": "Nasales NK/T-Zell-Lymphom",
"system": "urn:oid:2.16.840.1.113883.6.43.1",
"version": "Zweite Revision"
},
"note": "Notes..."
},
"tumorCellContent": {
- "id": "5c408779-8f1c-4c44-a3f1-0bee32a0b7f1",
+ "id": "32605a2f-4c5c-4f5a-9909-326955405fe0",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"specimen": {
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
"method": {
@@ -407,61 +461,57 @@
"display": "Histologisch",
"system": "dnpm-dip/mtb/tumor-cell-content/method"
},
- "value": 0.022777185931090127
+ "value": 0.40875903241796807
}
}
}
],
"ihcReports": [
{
- "id": "d913c59b-7788-4931-a24c-5a71995ee77b",
+ "id": "ced8a836-262e-4067-b272-94c8f9222446",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"specimen": {
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
- "issuedOn": "2025-05-30",
- "journalId": "7f39e2f3-6b0f-486d-b2d2-a1c8c4ec0493",
- "blockIds": [
- "a91d53a8-7949-4233-b710-1f1b456ff8c7"
- ],
+ "issuedOn": "2025-06-24",
"results": {
"proteinExpression": [
{
- "id": "60538b11-9da7-4248-a878-00dbfe31cf37",
+ "id": "07bdd4f4-6df7-4c22-9ef2-2abb86cf4666",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"protein": {
- "code": "HGNC:34",
- "display": "ABCA4",
+ "code": "HGNC:3942",
+ "display": "MTOR",
"system": "https://www.genenames.org/"
},
"value": {
- "code": "2+",
- "display": "2+",
+ "code": "not-exp",
+ "display": "Nicht exprimiert",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
- "tpsScore": 15,
+ "tpsScore": 21,
"icScore": {
- "code": "3",
- "display": ">= 10%",
+ "code": "1",
+ "display": ">= 1%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
- "code": "5",
- "display": ">= 50%",
+ "code": "6",
+ "display": ">= 75%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
},
{
- "id": "32a8c01c-4bd7-4ae9-8835-6ba747fe1991",
+ "id": "38ac3c86-7d13-4d5d-a85d-7d79846aa85d",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"protein": {
@@ -470,42 +520,42 @@
"system": "https://www.genenames.org/"
},
"value": {
- "code": "not-exp",
- "display": "Nicht exprimiert",
+ "code": "3+",
+ "display": "3+",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
- "tpsScore": 33,
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"icScore": {
- "code": "2",
- "display": ">= 5%",
+ "code": "0",
+ "display": "< 1%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
- "code": "5",
- "display": ">= 50%",
+ "code": "1",
+ "display": ">= 1%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
},
{
- "id": "edd1cb04-8c1a-49f7-bb88-36ee576ade21",
+ "id": "002dd577-7a1e-4e47-ae63-bc84e641565e",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"protein": {
- "code": "HGNC:886",
- "display": "ATRX",
+ "code": "HGNC:34",
+ "display": "ABCA4",
"system": "https://www.genenames.org/"
},
"value": {
- "code": "3+",
- "display": "3+",
+ "code": "not-exp",
+ "display": "Nicht exprimiert",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
- "tpsScore": 95,
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"icScore": {
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- "display": ">= 5%",
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"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
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"tcScore": {
@@ -515,14 +565,14 @@
}
},
{
- "id": "8e7f8610-2bab-4baa-9567-98a0c71eead4",
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"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"protein": {
- "code": "HGNC:33",
- "display": "ABCA3",
+ "code": "HGNC:3690",
+ "display": "FGFR3",
"system": "https://www.genenames.org/"
},
"value": {
@@ -530,10 +580,10 @@
"display": "Nicht exprimiert",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
- "tpsScore": 81,
+ "tpsScore": 29,
"icScore": {
- "code": "3",
- "display": ">= 10%",
+ "code": "0",
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"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
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"tcScore": {
@@ -543,30 +593,58 @@
}
},
{
- "id": "845b905d-eef9-4a2c-9aff-cde382933968",
+ "id": "cad30474-e6e2-4923-bd05-57bbce01708c",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"protein": {
- "code": "HGNC:1100",
- "display": "BRCA1",
+ "code": "HGNC:1753",
+ "display": "CDH13",
"system": "https://www.genenames.org/"
},
"value": {
- "code": "1+",
- "display": "1+",
+ "code": "unknown",
+ "display": "untersucht, kein Ergebnis",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
- "tpsScore": 70,
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"icScore": {
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- "display": ">= 1%",
+ "code": "2",
+ "display": ">= 5%",
+ "system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
+ },
+ "tcScore": {
+ "code": "3",
+ "display": ">= 10%",
+ "system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
+ }
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+ "patient": {
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
+ "type": "Patient"
+ },
+ "protein": {
+ "code": "HGNC:1097",
+ "display": "BRAF",
+ "system": "https://www.genenames.org/"
+ },
+ "value": {
+ "code": "not-exp",
+ "display": "Nicht exprimiert",
+ "system": "dnpm-dip/mtb/ihc/protein-expression/result"
+ },
+ "tpsScore": 81,
+ "icScore": {
+ "code": "2",
+ "display": ">= 5%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
- "code": "5",
- "display": ">= 50%",
+ "code": "2",
+ "display": ">= 5%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
}
@@ -577,19 +655,19 @@
],
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+ "id": "3788004a-2c21-4dfb-92d8-70d1b31e39d7",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
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+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"type": {
- "code": "single",
- "display": "Single",
+ "code": "genome-long-read",
+ "display": "Genome long-read",
"system": "dnpm-dip/ngs/type"
},
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@@ -597,19 +675,19 @@
"kitType": "Kit Type",
"kitManufacturer": "Manufacturer",
"sequencer": "Sequencer",
- "referenceGenome": "HG38",
+ "referenceGenome": "HG19",
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}
],
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- "id": "94927ed9-449d-4b20-b87b-8d30c3262cd8",
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
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- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
"method": {
@@ -617,36 +695,36 @@
"display": "Bioinformatisch",
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},
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"type": "Patient"
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"type": "TumorSpecimen"
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"unit": "Mutations per megabase"
},
"interpretation": {
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+ "code": "low",
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"system": "dnpm-dip/mtb/ngs/tmb/interpretation"
}
},
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@@ -656,20 +734,20 @@
}
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@@ -679,25 +757,74 @@
},
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"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
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- "display": "BRAFP1",
+ "code": "HGNC:886",
+ "display": "ATRX",
+ "system": "https://www.genenames.org/"
+ },
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+ "display": "Intronic",
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+ }
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+ "allelicFrequency": 0.26942267625669825,
+ "interpretation": {
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+ "display": "Benign",
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+ "type": "Patient"
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+ "value": "06722bb8-59d3-40f1-9a83-3e0587d69cbb",
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+ "system": "https://cancer.sanger.ac.uk/cosmic"
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+ "display": "TP53",
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@@ -708,19 +835,19 @@
}
],
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+ "refAllele": "G",
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+ "proteinChange": "p.Cys28_Lys29delinsTrp",
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@@ -728,48 +855,48 @@
}
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+ "value": "ffd8916a-95a7-4750-ab49-a25a576009e1",
"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
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- "display": "FGFR3",
+ "code": "HGNC:886",
+ "display": "ATRX",
"system": "https://www.genenames.org/"
},
"localization": [
{
- "code": "splicing-region",
- "display": "splicing region",
+ "code": "intergenic",
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],
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- "proteinChange": "p.Trp24=/Cys",
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+ "refAllele": "T",
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@@ -777,74 +904,74 @@
}
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"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
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- "display": "KRAS",
+ "code": "HGNC:11998",
+ "display": "TP53",
"system": "https://www.genenames.org/"
},
"localization": [
{
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- "display": "Intergenic",
+ "code": "intronic",
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- "display": "ABCA4",
+ "code": "HGNC:1097",
+ "display": "BRAF",
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@@ -855,68 +982,68 @@
}
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+ "altAllele": "A",
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+ "proteinChange": "p.Cys28_Lys29delinsTrp",
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- "display": "Likely pathogenic",
+ "code": "2",
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"system": "https://www.ncbi.nlm.nih.gov/clinvar"
}
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
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},
{
- "value": "1c6569e0-a8e6-477a-956a-c95e04097143",
+ "value": "e53e0494-e897-4272-86d1-5d4614eff405",
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}
],
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+ "chromosome": "chrX",
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- "display": "ABRAXAS1",
+ "code": "HGNC:21597",
+ "display": "ACAD10",
"system": "https://www.genenames.org/"
},
"localization": [
{
- "code": "coding-region",
- "display": "Coding region",
+ "code": "splicing-region",
+ "display": "splicing region",
"system": "dnpm-dip/variant/localization"
}
],
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+ "value": "4f365f89-e0e0-4019-b84c-67efb2ca118d",
"system": "https://www.ensembl.org"
},
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+ "exonId": "2",
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"code": "2",
"display": "Likely benign",
@@ -924,63 +1051,63 @@
}
},
{
- "id": "c6e4a8ca-9fd5-46d6-b9c3-4fb92fa3ad7f",
+ "id": "828dfee4-37e4-485a-8c6f-49f863903f3f",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
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{
- "value": "414cfb9c-1a27-49f4-89a7-20fa9b34d4c1",
+ "value": "a05503d8-3ebc-43e8-a7bd-c6f2893b87fd",
"system": "https://www.ncbi.nlm.nih.gov/snp"
},
{
- "value": "029491a2-a2ec-4153-8f58-0a0643b82c7f",
+ "value": "2868dd12-0a79-4d33-b421-8d4fa94a79f2",
"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
- "chromosome": "chr19",
+ "chromosome": "chr22",
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- "code": "HGNC:25829",
- "display": "ABRAXAS1",
+ "code": "HGNC:886",
+ "display": "ATRX",
"system": "https://www.genenames.org/"
},
"localization": [
{
- "code": "regulatory-region",
- "display": "Regulatory region",
+ "code": "coding-region",
+ "display": "Coding region",
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}
],
"transcriptId": {
- "value": "12393377-f07e-468b-bb15-a5dd2498cd31",
- "system": "https://www.ensembl.org"
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+ "system": "https://www.ncbi.nlm.nih.gov/refseq"
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- "altAllele": "G",
+ "altAllele": "T",
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- "dnaChange": "c.77C>G",
- "proteinChange": "p.Lys23_Val25del",
+ "dnaChange": "c.535C>T",
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- "display": "Benign",
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+ "display": "Likely benign",
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}
}
],
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{
- "id": "def11b75-84d6-4910-8f0a-e289326fa14c",
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
- "chromosome": "chr17",
+ "chromosome": "chr20",
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{
"code": "intronic",
@@ -989,66 +1116,118 @@
}
],
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},
{
- "code": "HGNC:5173",
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+ "code": "HGNC:3942",
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},
{
- "code": "HGNC:25662",
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+ "code": "HGNC:1777",
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},
{
"code": "HGNC:76",
"display": "ABL1",
"system": "https://www.genenames.org/"
+ }
+ ],
+ "reportedFocality": "partial q-arm",
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+ "display": "Low-level-gain",
+ "system": "dnpm-dip/mtb/ngs-report/cnv/type"
+ },
+ "copyNumberNeutralLoH": [
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+ "system": "https://www.genenames.org/"
},
{
- "code": "HGNC:886",
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},
{
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+ "code": "HGNC:25829",
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+ "system": "https://www.genenames.org/"
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+ "code": "HGNC:391",
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"system": "https://www.genenames.org/"
},
{
"code": "HGNC:21298",
"display": "AACS",
"system": "https://www.genenames.org/"
+ }
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+ {
+ "id": "da5cc035-4c3a-4178-b8f1-9beb10e26bfa",
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+ "type": "Patient"
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+ "chromosome": "chr12",
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+ "code": "coding-region",
+ "display": "Coding region",
+ "system": "dnpm-dip/variant/localization"
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},
{
- "code": "HGNC:3689",
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+ "code": "HGNC:886",
+ "display": "ATRX",
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:3942",
- "display": "MTOR",
+ "code": "HGNC:21298",
+ "display": "AACS",
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:3236",
- "display": "EGFR",
+ "code": "HGNC:3689",
+ "display": "FGFR2",
"system": "https://www.genenames.org/"
}
],
@@ -1060,28 +1239,28 @@
},
"copyNumberNeutralLoH": [
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- "code": "HGNC:33",
- "display": "ABCA3",
+ "code": "HGNC:3690",
+ "display": "FGFR3",
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:5173",
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+ "display": "AKT1",
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},
{
- "code": "HGNC:1753",
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+ "code": "HGNC:3689",
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},
{
- "code": "HGNC:1777",
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+ "code": "HGNC:21597",
+ "display": "ACAD10",
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},
{
- "code": "HGNC:1097",
- "display": "BRAF",
+ "code": "HGNC:6407",
+ "display": "KRAS",
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},
{
@@ -1093,31 +1272,16 @@
"code": "HGNC:1100",
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}
]
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{
- "id": "a8702d47-5520-458e-929f-fdd2bc55fe17",
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- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
- "chromosome": "chr22",
+ "chromosome": "chr2",
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{
"code": "intergenic",
@@ -1126,26 +1290,36 @@
}
],
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+ "display": "ABRAXAS1",
+ "system": "https://www.genenames.org/"
+ },
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"code": "HGNC:3690",
"display": "FGFR3",
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:1097",
- "display": "BRAF",
+ "code": "HGNC:1100",
+ "display": "BRCA1",
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{
@@ -1154,18 +1328,23 @@
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:18615",
- "display": "BRAFP1",
+ "code": "HGNC:1777",
+ "display": "CDK6",
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},
{
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"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:21298",
- "display": "AACS",
+ "code": "HGNC:3689",
+ "display": "FGFR2",
+ "system": "https://www.genenames.org/"
+ },
+ {
+ "code": "HGNC:3942",
+ "display": "MTOR",
"system": "https://www.genenames.org/"
},
{
@@ -1174,36 +1353,31 @@
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:21597",
- "display": "ACAD10",
+ "code": "HGNC:18615",
+ "display": "BRAFP1",
+ "system": "https://www.genenames.org/"
+ },
+ {
+ "code": "HGNC:6407",
+ "display": "KRAS",
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}
],
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"type": {
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- "display": "Low-level-gain",
+ "code": "high-level-gain",
+ "display": "High-level-gain",
"system": "dnpm-dip/mtb/ngs-report/cnv/type"
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- "system": "https://www.genenames.org/"
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- "display": "BRCA1",
+ "code": "HGNC:1097",
+ "display": "BRAF",
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{
@@ -1212,68 +1386,78 @@
"system": "https://www.genenames.org/"
},
{
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- "display": "FGFR2",
- "system": "https://www.genenames.org/"
- },
- {
- "code": "HGNC:3236",
- "display": "EGFR",
+ "code": "HGNC:6407",
+ "display": "KRAS",
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:18615",
- "display": "BRAFP1",
+ "code": "HGNC:1753",
+ "display": "CDH13",
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},
{
- "code": "HGNC:6407",
- "display": "KRAS",
+ "code": "HGNC:3690",
+ "display": "FGFR3",
"system": "https://www.genenames.org/"
}
]
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{
- "id": "e459c5b6-16ab-45ad-be8e-588a466fa42e",
+ "id": "79b1b2f1-eece-469a-bf9d-d742ace3b4f5",
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
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- "chromosome": "chr22",
+ "chromosome": "chr4",
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- "code": "regulatory-region",
- "display": "Regulatory region",
+ "code": "splicing-region",
+ "display": "splicing region",
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}
],
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{
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},
{
"code": "HGNC:6407",
"display": "KRAS",
"system": "https://www.genenames.org/"
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+ "code": "HGNC:1097",
+ "display": "BRAF",
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+ "display": "AAGAB",
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@@ -1284,23 +1468,18 @@
},
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- "display": "ABCA3",
- "system": "https://www.genenames.org/"
- },
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- "display": "CDH13",
+ "code": "HGNC:11998",
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},
{
- "code": "HGNC:1100",
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+ "code": "HGNC:25829",
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},
{
- "code": "HGNC:886",
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+ "code": "HGNC:391",
+ "display": "AKT1",
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{
@@ -1309,97 +1488,72 @@
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:9967",
- "display": "RET",
- "system": "https://www.genenames.org/"
- },
- {
- "code": "HGNC:3236",
- "display": "EGFR",
+ "code": "HGNC:34",
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},
{
- "code": "HGNC:6407",
- "display": "KRAS",
+ "code": "HGNC:18615",
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}
]
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{
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
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},
- "chromosome": "chr22",
+ "chromosome": "chr1",
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{
- "code": "splicing-region",
- "display": "splicing region",
+ "code": "intronic",
+ "display": "Intronic",
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}
],
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- "display": "AAGAB",
+ "code": "HGNC:76",
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},
{
- "code": "HGNC:76",
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+ "code": "HGNC:6407",
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},
{
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+ "code": "HGNC:1097",
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{
- "code": "HGNC:6407",
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+ "code": "HGNC:1100",
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{
@@ -1411,11 +1565,6 @@
"code": "HGNC:3942",
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],
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@@ -1426,8 +1575,8 @@
},
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+ "code": "HGNC:25829",
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{
@@ -1436,132 +1585,170 @@
"system": "https://www.genenames.org/"
},
{
- "code": "HGNC:1753",
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{
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]
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{
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],
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},
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],
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+ "display": "High-level-gain",
+ "system": "dnpm-dip/mtb/ngs-report/cnv/type"
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},
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+ "display": "BRCA1",
+ "system": "https://www.genenames.org/"
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
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"localization": [
@@ -1572,29 +1759,29 @@
}
],
"fusionPartner5prime": {
- "chromosome": "chr8",
+ "chromosome": "chr10",
"gene": {
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- "display": "BRAF",
+ "code": "HGNC:1100",
+ "display": "BRCA1",
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},
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+ "display": "BRAF",
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{
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@@ -1605,97 +1792,105 @@
}
],
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+ "chromosome": "chr3",
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+ "display": "MDM2",
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},
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{
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+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
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},
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- "display": "Intronic",
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+ "display": "Coding region",
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}
],
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+ "chromosome": "chr3",
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- "display": "Coding region",
+ "code": "splicing-region",
+ "display": "splicing region",
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}
],
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@@ -1704,86 +1899,95 @@
}
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}
],
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{
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@@ -1796,234 +2000,234 @@
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{
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+ "id": "ec5cf70d-41cf-4ae6-80c7-f97c762b49bf",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"externalIds": [
{
- "value": "5b988b8f-54a7-43b7-a001-0feaf31fcfef",
+ "value": "05989288-3ed9-4a9e-b0e8-d71e6b00e486",
"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
"localization": [
{
- "code": "regulatory-region",
- "display": "Regulatory region",
+ "code": "splicing-region",
+ "display": "splicing region",
"system": "dnpm-dip/variant/localization"
}
],
"fusionPartner5prime": {
"transcriptId": {
- "value": "41d8e247-25d3-426b-b3f7-fddf5cdb558c",
- "system": "https://www.ensembl.org"
+ "value": "7b5e30e2-2ad0-43ee-a420-c012525ecdc8",
+ "system": "https://www.ncbi.nlm.nih.gov/refseq"
},
- "exonId": "7",
+ "exonId": "8",
"gene": {
"code": "HGNC:3236",
"display": "EGFR",
"system": "https://www.genenames.org/"
},
- "position": 376,
- "strand": "+"
+ "position": 768,
+ "strand": "-"
},
"fusionPartner3prime": {
"transcriptId": {
- "value": "5ec975b9-d2f1-4717-82bd-c7ce4dd2734c",
+ "value": "7bb8a065-afaa-4f70-850f-3b4df9a62f43",
"system": "https://www.ncbi.nlm.nih.gov/refseq"
},
- "exonId": "10",
+ "exonId": "3",
"gene": {
- "code": "HGNC:1100",
- "display": "BRCA1",
+ "code": "HGNC:9967",
+ "display": "RET",
"system": "https://www.genenames.org/"
},
- "position": 356,
+ "position": 720,
"strand": "-"
},
"effect": "Effect",
"reportedNumReads": 4
},
{
- "id": "7a5955a4-c7d4-4fe8-a529-0a0c01b84743",
+ "id": "b11ccdea-d5ff-4fb0-ba78-4da793e4ffd8",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"externalIds": [
{
- "value": "032e1ac6-e21f-4311-98a6-ad6a19ee7b35",
+ "value": "5642d5ed-d3ff-47d4-975d-070414c71c60",
"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
"localization": [
{
- "code": "intergenic",
- "display": "Intergenic",
+ "code": "splicing-region",
+ "display": "splicing region",
"system": "dnpm-dip/variant/localization"
}
],
"fusionPartner5prime": {
"transcriptId": {
- "value": "6e43eb94-48ca-41e2-a57e-bf964c1d953a",
+ "value": "04f2a51a-d782-42d2-a313-67e2ea362155",
"system": "https://www.ncbi.nlm.nih.gov/refseq"
},
- "exonId": "5",
+ "exonId": "9",
"gene": {
- "code": "HGNC:391",
- "display": "AKT1",
+ "code": "HGNC:21597",
+ "display": "ACAD10",
"system": "https://www.genenames.org/"
},
- "position": 714,
+ "position": 575,
"strand": "-"
},
"fusionPartner3prime": {
"transcriptId": {
- "value": "91fb4eaf-c3da-434b-991b-cbaeee330de2",
+ "value": "56e704c3-b889-4768-b33a-f0be5cc3ea4d",
"system": "https://www.ncbi.nlm.nih.gov/refseq"
},
- "exonId": "11",
+ "exonId": "6",
"gene": {
- "code": "HGNC:34",
- "display": "ABCA4",
+ "code": "HGNC:18615",
+ "display": "BRAFP1",
"system": "https://www.genenames.org/"
},
- "position": 357,
+ "position": 537,
"strand": "-"
},
"effect": "Effect",
- "reportedNumReads": 4
+ "reportedNumReads": 8
}
],
"rnaSeqs": []
@@ -2032,148 +2236,78 @@
],
"carePlans": [
{
- "id": "01b19e31-f38b-4b69-bb72-01248bb92d11",
+ "id": "75f515ff-44e9-44ef-8de4-20750f160322",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"geneticCounselingRecommendation": {
- "id": "f75d972c-f6be-4be9-bd2a-aeef0d492072",
+ "id": "708baa95-c6de-4e1d-9e2c-f40dd1d14a32",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"reason": {
- "code": "other",
- "display": "Andere",
+ "code": "self-anamnesis",
+ "display": "Eigenanamnese",
"system": "dnpm-dip/mtb/recommendation/genetic-counseling/reason"
}
},
"medicationRecommendations": [
{
- "id": "8c9e7e7f-daea-4b7b-ad72-6ef6be070f95",
- "patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
- "type": "Patient"
- },
- "reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
- "type": "MTBDiagnosis"
- },
- "issuedOn": "2025-05-30",
- "priority": {
- "code": "1",
- "display": "1",
- "system": "dnpm-dip/recommendation/priority"
- },
- "levelOfEvidence": {
- "grading": {
- "code": "m2A",
- "display": "m2A",
- "system": "dnpm-dip/mtb/level-of-evidence/grading"
- },
- "addendums": [
- {
- "code": "iv",
- "display": "iv",
- "system": "dnpm-dip/mtb/level-of-evidence/addendum"
- }
- ],
- "publications": [
- {
- "id": "482370142",
- "system": "https://pubmed.ncbi.nlm.nih.gov",
- "type": "Publication"
- }
- ]
- },
- "category": {
- "code": "HO",
- "display": "Hormontherapie",
- "system": "dnpm-dip/mtb/recommendation/systemic-therapy/category"
- },
- "medication": [
- {
- "code": "L01EX01",
- "display": "Sunitinib",
- "system": "http://fhir.de/CodeSystem/bfarm/atc",
- "version": "2025"
- }
- ],
- "useType": {
- "code": "in-label",
- "display": "In-label Use",
- "system": "dnpm-dip/mtb/recommendation/systemic-therapy/use-type"
- },
- "supportingVariants": [
- {
- "variant": {
- "id": "4705fb0d-d429-47d6-8191-c07d06d16c7a",
- "type": "Variant"
- },
- "gene": {
- "code": "HGNC:25662",
- "display": "AAGAB",
- "system": "https://www.genenames.org/"
- }
- }
- ]
- },
- {
- "id": "5adb8293-f9d1-4e65-bdcf-9d4803bd9d1c",
+ "id": "1db4d8d9-d6c0-48d1-b135-d040403654f9",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"priority": {
- "code": "2",
- "display": "2",
+ "code": "4",
+ "display": "4",
"system": "dnpm-dip/recommendation/priority"
},
"levelOfEvidence": {
"grading": {
- "code": "m4",
- "display": "m4",
+ "code": "m2B",
+ "display": "m2B",
"system": "dnpm-dip/mtb/level-of-evidence/grading"
},
"addendums": [
{
- "code": "iv",
- "display": "iv",
+ "code": "R",
+ "display": "R",
"system": "dnpm-dip/mtb/level-of-evidence/addendum"
}
],
"publications": [
{
- "id": "1987640662",
+ "id": "1802087682",
"system": "https://pubmed.ncbi.nlm.nih.gov",
"type": "Publication"
}
]
},
"category": {
- "code": "HO",
- "display": "Hormontherapie",
+ "code": "SO",
+ "display": "Sonstiges",
"system": "dnpm-dip/mtb/recommendation/systemic-therapy/category"
},
"medication": [
{
- "code": "L01FX01",
- "display": "Edrecolomab",
+ "code": "L01XX77",
+ "display": "Adagrasib",
"system": "http://fhir.de/CodeSystem/bfarm/atc",
"version": "2025"
}
@@ -2186,12 +2320,12 @@
"supportingVariants": [
{
"variant": {
- "id": "c6e4a8ca-9fd5-46d6-b9c3-4fb92fa3ad7f",
+ "id": "a9487572-a2a5-4074-ba8b-1e73cf92b378",
"type": "Variant"
},
"gene": {
- "code": "HGNC:25829",
- "display": "ABRAXAS1",
+ "code": "HGNC:11998",
+ "display": "TP53",
"system": "https://www.genenames.org/"
}
}
@@ -2200,57 +2334,57 @@
],
"procedureRecommendations": [
{
- "id": "7c51af31-3e47-467b-aee6-87a6aee9068a",
+ "id": "1f5aebc0-2f32-4fdf-96e3-ba2309a580e3",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"priority": {
- "code": "1",
- "display": "1",
+ "code": "2",
+ "display": "2",
"system": "dnpm-dip/recommendation/priority"
},
"levelOfEvidence": {
"grading": {
- "code": "m1A",
- "display": "m1A",
+ "code": "undefined",
+ "display": "Nicht definiert",
"system": "dnpm-dip/mtb/level-of-evidence/grading"
},
"addendums": [
{
- "code": "iv",
- "display": "iv",
+ "code": "R",
+ "display": "R",
"system": "dnpm-dip/mtb/level-of-evidence/addendum"
}
],
"publications": [
{
- "id": "45577081",
+ "id": "519591396",
"system": "https://pubmed.ncbi.nlm.nih.gov",
"type": "Publication"
}
]
},
"code": {
- "code": "WS",
- "display": "Wait and see",
+ "code": "AS",
+ "display": "Active Surveillance",
"system": "dnpm-dip/mtb/recommendation/procedure/category"
},
"supportingVariants": [
{
"variant": {
- "id": "7748dd2f-e547-4412-996b-c8116040a5d4",
+ "id": "828dfee4-37e4-485a-8c6f-49f863903f3f",
"type": "Variant"
},
"gene": {
- "code": "HGNC:25829",
- "display": "ABRAXAS1",
+ "code": "HGNC:886",
+ "display": "ATRX",
"system": "https://www.genenames.org/"
}
}
@@ -2259,46 +2393,46 @@
],
"studyEnrollmentRecommendations": [
{
- "id": "3d4c243c-2908-46b7-9faf-d795fd883ac0",
+ "id": "590cd85f-24b9-435c-bb63-8a719dfa7c8e",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"levelOfEvidence": {
"grading": {
- "code": "m2A",
- "display": "m2A",
+ "code": "m2B",
+ "display": "m2B",
"system": "dnpm-dip/mtb/level-of-evidence/grading"
},
"addendums": [
{
- "code": "iv",
- "display": "iv",
+ "code": "R",
+ "display": "R",
"system": "dnpm-dip/mtb/level-of-evidence/addendum"
}
],
"publications": [
{
- "id": "482370142",
+ "id": "1802087682",
"system": "https://pubmed.ncbi.nlm.nih.gov",
"type": "Publication"
}
]
},
"priority": {
- "code": "4",
- "display": "4",
+ "code": "1",
+ "display": "1",
"system": "dnpm-dip/recommendation/priority"
},
"study": [
{
- "id": "8547-845744-34-56",
+ "id": "0509-104679-07-52",
"system": "Eudra-CT",
"type": "Study"
}
@@ -2306,12 +2440,12 @@
"supportingVariants": [
{
"variant": {
- "id": "4705fb0d-d429-47d6-8191-c07d06d16c7a",
+ "id": "a9487572-a2a5-4074-ba8b-1e73cf92b378",
"type": "Variant"
},
"gene": {
- "code": "HGNC:25662",
- "display": "AAGAB",
+ "code": "HGNC:11998",
+ "display": "TP53",
"system": "https://www.genenames.org/"
}
}
@@ -2320,30 +2454,30 @@
],
"histologyReevaluationRequests": [
{
- "id": "a641f201-fa1e-4650-8fba-adf3665040ed",
+ "id": "38f2133a-f1cf-4af6-b441-c21953e43ed3",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"specimen": {
- "id": "c59253e3-3c11-40bd-bc35-7c089f734862",
+ "id": "c3f30fe7-d193-4cde-a3c2-ef8f2497df51",
"type": "TumorSpecimen"
},
- "issuedOn": "2025-05-30"
+ "issuedOn": "2025-06-24"
}
],
"rebiopsyRequests": [
{
- "id": "2501cd78-c360-40c1-9ced-455fa7172191",
+ "id": "0860944d-ede1-453b-b7ea-b13ea0fb1d2f",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"tumorEntity": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
"type": "MTBDiagnosis"
},
- "issuedOn": "2025-05-30"
+ "issuedOn": "2025-06-24"
}
],
"notes": [
@@ -2353,79 +2487,45 @@
],
"followUps": [
{
- "date": "2025-02-07",
+ "date": "2025-06-03",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
- "lastContactDate": "2025-02-07"
+ "lastContactDate": "2025-06-03"
}
],
"claims": [
{
- "id": "4aa57f09-d47a-4916-852e-c79175a0eca7",
+ "id": "5ec237d4-4857-475a-9931-0aa374a93634",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"recommendation": {
- "id": "8c9e7e7f-daea-4b7b-ad72-6ef6be070f95",
+ "id": "1db4d8d9-d6c0-48d1-b135-d040403654f9",
"type": "MTBMedicationRecommendation"
},
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"stage": {
- "code": "revocation",
- "display": "Widerspruch",
- "system": "dnpm-dip/mtb/claim/stage"
- }
- },
- {
- "id": "fa9b668c-c39d-42a9-bdb2-410bc3f4a361",
- "patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
- "type": "Patient"
- },
- "recommendation": {
- "id": "5adb8293-f9d1-4e65-bdcf-9d4803bd9d1c",
- "type": "MTBMedicationRecommendation"
- },
- "issuedOn": "2025-05-30",
- "stage": {
- "code": "initial-claim",
- "display": "Erstantrag",
+ "code": "unknown",
+ "display": "Unbekannt",
"system": "dnpm-dip/mtb/claim/stage"
}
}
],
"claimResponses": [
{
- "id": "db18a72a-293e-4f2d-bfe5-273776f8286b",
+ "id": "fed8817e-708a-4230-a7e1-95594b67e5ce",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"claim": {
- "id": "4aa57f09-d47a-4916-852e-c79175a0eca7",
+ "id": "5ec237d4-4857-475a-9931-0aa374a93634",
"type": "Claim"
},
- "issuedOn": "2025-05-30",
- "status": {
- "code": "accepted",
- "display": "Angenommen",
- "system": "dnpm-dip/mtb/claim-response/status"
- }
- },
- {
- "id": "ff5f495e-20c6-4c18-b150-4799343049c4",
- "patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
- "type": "Patient"
- },
- "claim": {
- "id": "fa9b668c-c39d-42a9-bdb2-410bc3f4a361",
- "type": "Claim"
- },
- "issuedOn": "2025-05-30",
+ "issuedOn": "2025-06-24",
"status": {
"code": "accepted",
"display": "Angenommen",
@@ -2437,36 +2537,41 @@
{
"history": [
{
- "id": "bc0b340d-17ea-4598-ad69-38d309e47182",
+ "id": "0b2347b7-3b85-442d-aa46-e9c5c9ee7802",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
+ "id": "c1731d5e-6cca-4f8e-bca6-de233926106e",
+ "display": "Bösartige Neubildung: Zentraler Drüsenkörper der Brustdrüse",
"type": "MTBDiagnosis"
},
"intent": {
- "code": "X",
- "display": "Keine Angabe",
+ "code": "P",
+ "display": "Palliativ",
"system": "dnpm-dip/therapy/intent"
},
"category": {
- "code": "N",
- "display": "Neoadjuvant",
+ "code": "S",
+ "display": "Sonstiges",
"system": "dnpm-dip/therapy/category"
},
"basedOn": {
- "id": "8c9e7e7f-daea-4b7b-ad72-6ef6be070f95",
+ "id": "1db4d8d9-d6c0-48d1-b135-d040403654f9",
"type": "MTBMedicationRecommendation"
},
- "recordedOn": "2025-05-30",
+ "recordedOn": "2025-06-24",
"status": {
- "code": "on-going",
- "display": "Laufend",
+ "code": "stopped",
+ "display": "Abgebrochen",
"system": "dnpm-dip/therapy/status"
},
+ "statusReason": {
+ "code": "progression",
+ "display": "Progression",
+ "system": "dnpm-dip/therapy/status-reason"
+ },
"recommendationFulfillmentStatus": {
"code": "partial",
"display": "Partiell",
@@ -2478,74 +2583,13 @@
"system": "dnpm-dip/therapy/dosage-density"
},
"period": {
- "start": "2024-11-08",
- "end": "2025-05-30"
+ "start": "2025-03-18",
+ "end": "2025-06-24"
},
"medication": [
{
- "code": "L01EX01",
- "display": "Sunitinib",
- "system": "http://fhir.de/CodeSystem/bfarm/atc",
- "version": "2025"
- }
- ],
- "notes": [
- "Notes on the therapy..."
- ]
- }
- ]
- },
- {
- "history": [
- {
- "id": "e3d4b435-0531-4d75-827c-0da914f054dd",
- "patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
- "type": "Patient"
- },
- "reason": {
- "id": "53155bb3-39f8-4cd9-aa9b-1675165bfdb8",
- "display": "Bösartige Neubildung: Tuba uterina [Falloppio]",
- "type": "MTBDiagnosis"
- },
- "intent": {
- "code": "K",
- "display": "Kurativ",
- "system": "dnpm-dip/therapy/intent"
- },
- "category": {
- "code": "A",
- "display": "Adjuvant",
- "system": "dnpm-dip/therapy/category"
- },
- "basedOn": {
- "id": "5adb8293-f9d1-4e65-bdcf-9d4803bd9d1c",
- "type": "MTBMedicationRecommendation"
- },
- "recordedOn": "2025-05-30",
- "status": {
- "code": "completed",
- "display": "Abgeschlossen",
- "system": "dnpm-dip/therapy/status"
- },
- "recommendationFulfillmentStatus": {
- "code": "complete",
- "display": "Komplett",
- "system": "dnpm-dip/therapy/recommendation-fulfillment-status"
- },
- "dosage": {
- "code": "over-50%",
- "display": ">= 50 %",
- "system": "dnpm-dip/therapy/dosage-density"
- },
- "period": {
- "start": "2024-10-25",
- "end": "2025-05-30"
- },
- "medication": [
- {
- "code": "L01FX01",
- "display": "Edrecolomab",
+ "code": "L01XX77",
+ "display": "Adagrasib",
"system": "http://fhir.de/CodeSystem/bfarm/atc",
"version": "2025"
}
@@ -2559,44 +2603,22 @@
],
"responses": [
{
- "id": "1bcd9695-739f-451b-a403-7def6fa43614",
+ "id": "70c6b774-ca26-4837-b424-5fc37e9a1548",
"patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
+ "id": "aca5a971-28be-4089-8128-0036a4fe6f1a",
"type": "Patient"
},
"therapy": {
- "id": "bc0b340d-17ea-4598-ad69-38d309e47182",
+ "id": "0b2347b7-3b85-442d-aa46-e9c5c9ee7802",
"type": "MTBSystemicTherapy"
},
- "effectiveDate": "2025-02-07",
+ "effectiveDate": "2025-06-03",
"method": {
"code": "RANO",
"display": "Nach RANO-Kriterien",
"system": "dnpm-dip/mtb/response/method"
},
"value": {
- "code": "PR",
- "display": "Partial Response",
- "system": "RECIST"
- }
- },
- {
- "id": "89f6c606-0ec6-4b1e-a316-56a16eb52ea2",
- "patient": {
- "id": "e14bf9b6-7982-4933-a648-cfdea6484f1c",
- "type": "Patient"
- },
- "therapy": {
- "id": "e3d4b435-0531-4d75-827c-0da914f054dd",
- "type": "MTBSystemicTherapy"
- },
- "effectiveDate": "2024-12-27",
- "method": {
- "code": "RECIST",
- "display": "Nach RECIST-Kriterien",
- "system": "dnpm-dip/mtb/response/method"
- },
- "value": {
"code": "SD",
"display": "Stable Disease",
"system": "RECIST"