blob: dcbeed4c48ad6b0fecca99b8a7ca9e55c7192296 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
|
import org.gradle.api.tasks.testing.logging.TestLogEvent
import org.jetbrains.kotlin.gradle.tasks.KotlinCompile
import org.springframework.boot.gradle.tasks.bundling.BootBuildImage
plugins {
war
id("org.springframework.boot") version "3.2.6"
id("io.spring.dependency-management") version "1.1.5"
kotlin("jvm") version "1.9.24"
kotlin("plugin.spring") version "1.9.24"
}
group = "de.ukw.ccc"
version = "0.9-SNAPSHOT"
var versions = mapOf(
"bwhc-dto-java" to "0.3.0",
"hapi-fhir" to "6.10.5",
"httpclient5" to "5.2.3",
"mockito-kotlin" to "5.3.1",
// Webjars
"echarts" to "5.4.3",
"htmx.org" to "1.9.11"
)
java {
sourceCompatibility = JavaVersion.VERSION_21
}
sourceSets {
create("integrationTest") {
compileClasspath += sourceSets.main.get().output
runtimeClasspath += sourceSets.main.get().output
}
}
val integrationTestImplementation: Configuration by configurations.getting {
extendsFrom(configurations.testImplementation.get())
extendsFrom(configurations.runtimeOnly.get())
}
configurations {
compileOnly {
extendsFrom(configurations.annotationProcessor.get())
}
}
repositories {
maven {
url = uri("https://git.dnpm.dev/api/packages/public/maven")
}
mavenCentral()
}
dependencies {
implementation("org.jetbrains.kotlin:kotlin-reflect")
implementation("org.springframework.boot:spring-boot-starter-thymeleaf")
implementation("org.springframework.boot:spring-boot-starter-web")
implementation("org.springframework.boot:spring-boot-starter-data-jdbc")
implementation("org.springframework.boot:spring-boot-starter-security")
implementation("org.springframework.boot:spring-boot-starter-oauth2-client")
implementation("org.thymeleaf.extras:thymeleaf-extras-springsecurity6")
implementation("com.fasterxml.jackson.module:jackson-module-kotlin")
implementation("org.springframework.kafka:spring-kafka")
implementation("org.flywaydb:flyway-mysql")
implementation("commons-codec:commons-codec")
implementation("io.projectreactor.kotlin:reactor-kotlin-extensions")
implementation("de.ukw.ccc:bwhc-dto-java:${versions["bwhc-dto-java"]}")
implementation("ca.uhn.hapi.fhir:hapi-fhir-base:${versions["hapi-fhir"]}")
implementation("ca.uhn.hapi.fhir:hapi-fhir-structures-r4:${versions["hapi-fhir"]}")
implementation("org.apache.httpcomponents.client5:httpclient5:${versions["httpclient5"]}")
implementation("com.jayway.jsonpath:json-path")
implementation("org.webjars:webjars-locator:0.52")
implementation("org.webjars.npm:echarts:${versions["echarts"]}")
implementation("org.webjars.npm:htmx.org:${versions["htmx.org"]}")
runtimeOnly("org.mariadb.jdbc:mariadb-java-client")
runtimeOnly("org.postgresql:postgresql")
developmentOnly("org.springframework.boot:spring-boot-devtools")
developmentOnly("org.springframework.boot:spring-boot-docker-compose")
annotationProcessor("org.springframework.boot:spring-boot-configuration-processor")
providedRuntime("org.springframework.boot:spring-boot-starter-tomcat")
testImplementation("org.springframework.boot:spring-boot-starter-test")
testImplementation("org.springframework.security:spring-security-test")
testImplementation("io.projectreactor:reactor-test")
testImplementation("org.mockito.kotlin:mockito-kotlin:${versions["mockito-kotlin"]}")
integrationTestImplementation("org.testcontainers:junit-jupiter")
integrationTestImplementation("org.testcontainers:postgresql")
// Override dependency version from org.testcontainers:junit-jupiter - CVE-2024-26308, CVE-2024-25710
integrationTestImplementation("org.apache.commons:commons-compress:1.26.1")
}
tasks.withType<KotlinCompile> {
kotlinOptions {
freeCompilerArgs += "-Xjsr305=strict"
jvmTarget = "21"
}
}
tasks.withType<Test> {
useJUnitPlatform()
testLogging {
events(TestLogEvent.FAILED, TestLogEvent.PASSED, TestLogEvent.SKIPPED)
}
}
task<Test>("integrationTest") {
description = "Runs integration tests"
testClassesDirs = sourceSets["integrationTest"].output.classesDirs
classpath = sourceSets["integrationTest"].runtimeClasspath
shouldRunAfter("test")
}
tasks.named<BootBuildImage>("bootBuildImage") {
imageName.set("ghcr.io/ccc-mf/etl-processor")
// Binding for CA Certs
bindings.set(listOf(
"$rootDir/bindings/ca-certificates/:/platform/bindings/ca-certificates"
))
environment.set(environment.get() + mapOf(
// Enable this line to embed CA Certs into image on build time
//"BP_EMBED_CERTS" to "true",
"BP_OCI_SOURCE" to "https://github.com/CCC-MF/etl-processor",
"BP_OCI_LICENSES" to "AGPLv3",
"BP_OCI_DESCRIPTION" to "ETL Processor for bwHC MTB files"
))
}
|