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-rw-r--r--DNPMPlugins/src/main/java/DNPM/DNPMHelper.java315
1 files changed, 0 insertions, 315 deletions
diff --git a/DNPMPlugins/src/main/java/DNPM/DNPMHelper.java b/DNPMPlugins/src/main/java/DNPM/DNPMHelper.java
deleted file mode 100644
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--- a/DNPMPlugins/src/main/java/DNPM/DNPMHelper.java
+++ /dev/null
@@ -1,315 +0,0 @@
-package DNPM;
-
-import java.util.ArrayList;
-import java.util.Arrays;
-import java.util.HashMap;
-import java.util.List;
-import java.util.Map;
-import org.hibernate.SQLQuery;
-import org.hibernate.Session;
-import org.hibernate.SessionFactory;
-import org.hibernate.transform.Transformers;
-import org.hibernate.type.StandardBasicTypes;
-import org.springframework.beans.factory.annotation.Autowired;
-
-import com.fasterxml.jackson.core.JsonProcessingException;
-import com.fasterxml.jackson.databind.ObjectMapper;
-
-import de.itc.onkostar.api.Disease;
-import de.itc.onkostar.api.IOnkostarApi;
-import de.itc.onkostar.api.Item;
-import de.itc.onkostar.api.Procedure;
-
-import de.itc.onkostar.api.analysis.AnalyzerRequirement;
-import de.itc.onkostar.api.analysis.IProcedureAnalyzer;
-import de.itc.onkostar.api.analysis.OnkostarPluginType;
-
-public class DNPMHelper implements IProcedureAnalyzer{
-
- // Laden der API
- @Autowired
- private IOnkostarApi onkostarApi;
-
- @Override
- public OnkostarPluginType getType() {
- // Typ des Plugins
- // Für das Interface IProcedureAnalyzer gültig sind ANALYZER und BACKEND_SERVICE
- return OnkostarPluginType.BACKEND_SERVICE;
- }
-
- @Override
- public String getVersion() {
- return "1";
- }
-
- @Override
- public String getName() {
- return "UMR DNPM";
- }
-
- @Override
- public String getDescription() {
- return "Methoden für DNPM-Formulare";
- }
-
- @Override
- public boolean isRelevantForDeletedProcedure() {
- return false;
- }
-
- @Override
- public boolean isSynchronous() {
- return true;
- }
-
- @Override
- public AnalyzerRequirement getRequirement() {
- return AnalyzerRequirement.PROCEDURE;
- }
-
- @Override
- public boolean isRelevantForAnalyzer(Procedure entry, Disease currentDisease) {
- // Plugin enthält nur Methoden für Formulare und soll nicht ausgeführt werden
- return false;
- }
-
- @Override
- public void analyze(Procedure entry, Disease currentDisease) {
- // wird nicht benötigt, da dass Plugin nicht ausgeführt wird
- }
-
- @SuppressWarnings("unchecked")
- public Object getVerweise(final Map<String, Object> input) {
- int ProcedureId = (int) input.get("ProcedureId");
- int PatientId = (int) input.get("PatientId");
- int value = 0;
- List<Map<String, String>> VerbundeneFormulare = new ArrayList<Map<String, String>>();
-
- try {
- SessionFactory sessionFactory = onkostarApi.getSessionFactory();
- Session session = sessionFactory.getCurrentSession();
- try {
- String sql = "SELECT prozedur.id AS procedure_id, prozedur.data_form_id, data_catalogue.name AS data_catalogue, data_catalogue_entry.name AS data_catalogue_entry, data_form.description AS formname, prozedur.beginndatum AS datum " +
- "FROM prozedur " +
- "LEFT JOIN data_form_data_catalogue ON data_form_data_catalogue.data_form_id = prozedur.data_form_id " +
- "LEFT JOIN data_catalogue_entry ON data_catalogue_entry.data_catalogue_id = data_form_data_catalogue.data_catalogue_id " +
- "LEFT JOIN data_catalogue ON data_catalogue.id = data_catalogue_entry.data_catalogue_id " +
- "LEFT JOIN data_form ON data_form.id = prozedur.data_form_id " +
- "WHERE patient_id = " + PatientId + " " +
- "AND geloescht = 0 " +
- "AND data_catalogue_entry.type = 'formReference' " +
- "GROUP BY prozedur.id, prozedur.data_form_id, data_catalogue.name, data_catalogue_entry.name";
-
- SQLQuery query = session.createSQLQuery(sql)
- .addScalar("procedure_id", StandardBasicTypes.INTEGER)
- .addScalar("data_form_id", StandardBasicTypes.INTEGER)
- .addScalar("data_catalogue", StandardBasicTypes.STRING)
- .addScalar("data_catalogue_entry", StandardBasicTypes.STRING)
- .addScalar("formname", StandardBasicTypes.STRING)
- .addScalar("datum", StandardBasicTypes.DATE);
-
- query.setResultTransformer(Transformers.aliasToBean(VerweisVon.class));
- List<VerweisVon> result = query.list();
- try {
- for (VerweisVon var : result) {
- sql = var.getSQL();
- query = session.createSQLQuery(sql)
- .addScalar("value", StandardBasicTypes.INTEGER);
- if (query.uniqueResult() != null) {
- value = (Integer)query.uniqueResult();
- }
- if (value == ProcedureId) {
- VerbundeneFormulare.add(Map.of("formular", var.getVerbundenesFormular()));
- value = 0;
- }
- }
- } catch (Exception e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
- } catch (Exception e) {
- return null;
- }
- } catch (Exception e) {
- return null;
- }
- return VerbundeneFormulare;
- }
-
- public Object getSystemischeTherapienFromDiagnose(final Map<String, Object> input) {
- int DiagnoseId = (int) input.get("DiagnoseId");
-
- String jsonStr = "";
- List<Object> Rueckgabewerte = new ArrayList<Object>();
- List<Procedure> Prozeduren = onkostarApi.getProceduresForDiseaseByForm(DiagnoseId, "OS.Systemische Therapie");
- // für jede Prozedur
- for (Procedure Prozedur : Prozeduren) {
- String Beginn = new String();
- String Ende = new String();
- String Wirkstoffe = new String();
- String Beendigung = new String();
- String Ergebnis = new String();
-
- // SubstanzenCodesListe enthält die Liste der SubstanzenCodes
- List<Map<String, String>> SubstanzenCodesListe = new ArrayList<Map<String, String>>();
-
- // alle Werte der Prozedur auslesen
- Map<String, Item> alleWerte = Prozedur.getAllValues();
- // Prozedurwerte enthält nur die interessanten Werte
- Map<String, Object> Prozedurwerte = new HashMap<>();
- // alle Werte durchgehen und die interessanten übernehmen
- for (Map.Entry<String, Item> WerteListe : alleWerte.entrySet()) {
- // Datum des Hauptformulars merken
- if (WerteListe.getKey().equals("Beendigung")) {
- Beendigung = WerteListe.getValue().getValue();
- }
- if (WerteListe.getKey().equals("Ergebnis")) {
- Ergebnis = WerteListe.getValue().getValue();
- }
- if (WerteListe.getKey().equals("Beginn")) {
- Beginn = WerteListe.getValue().getString();// + "," + WerteListe.getValue().getDateAccuracy();
- }
- if (WerteListe.getKey().equals("Ende")) {
- Ende = WerteListe.getValue().getString();// + "," + WerteListe.getValue().getDateAccuracy();
- }
- // im Subformular (SubstanzenList) Substanzen auslesen
- if (WerteListe.getKey().equals("SubstanzenList")) {
- int Index = -1;
- // SubstanzenCodesListe enthält die Liste der SubstanzenCodes eines Subformulars
- ArrayList<Map<String, Map<String, String>>> Subformular = new ArrayList<>();
- Subformular = WerteListe.getValue().getValue();
- // Werte aus Subformular verarbeiten
- for (Map<String, Map<String, String>> SubformularWerte: Subformular) {
-
- // SubstanzenCodes enthält den Code und den Namen einer Substanz
- Map<String, String> SubstanzenCodes = new HashMap<String, String>();
- // Index des Codes (Substanz)
- Index = Arrays.asList((SubformularWerte.keySet().toArray())).indexOf("Substanz");
- if (SubformularWerte.values().toArray()[Index].toString().matches("[A-V]0[1-9][A-Z]{2}[0-9]{0,2}")) {
- SubstanzenCodes.put("system", "ATC");
- } else {
- SubstanzenCodes.put("system", "other");
- }
-
- SubstanzenCodes.put("code", (String) SubformularWerte.values().toArray()[Index]);
- // Index der Substanz (Substanz_shortDescription)
- Index = Arrays.asList((SubformularWerte.keySet().toArray())).indexOf("Substanz_shortDescription");
- SubstanzenCodes.put("substance", (String) SubformularWerte.values().toArray()[Index]);
- SubstanzenCodesListe.add(SubstanzenCodes);
- Wirkstoffe = Wirkstoffe + (String) SubformularWerte.values().toArray()[Index] + ", ";
- }
- }
- }
- ObjectMapper Obj = new ObjectMapper();
- try {
- jsonStr = Obj.writeValueAsString(SubstanzenCodesListe);
- } catch (JsonProcessingException e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
- Prozedurwerte.put("Beginn", Beginn);
- Prozedurwerte.put("Ende", Ende);
- Prozedurwerte.put("Beendigung", Beendigung);
- Prozedurwerte.put("Ergebnis", Ergebnis);
- Prozedurwerte.put("Wirkstoffe", Wirkstoffe.substring(0, Wirkstoffe.length()-2));
- Prozedurwerte.put("WirkstoffCodes", jsonStr);
- Rueckgabewerte.add(Prozedurwerte);
- }
- return Rueckgabewerte;
- }
-
- public Object getProzedurenFromDiagnose(final Map<String, Object> input) {
- String dataForm = (String) input.get("dataForm");
- int DiagnoseId = (int) input.get("DiagnoseId");
- int PatientId = (int) input.get("PatientId");
- // Prozedur, Feldname, Wert
-
- List<Object> Formulare = new ArrayList<Object>();
- String jsonStr = "";
- List<Procedure> Prozeduren = onkostarApi.getProceduresByPatientId(PatientId);
- for (Procedure Prozedur: Prozeduren ) {
- // Formular gehört zur aktuellen Diagnose und hat den angegebenen Namen
- if (Prozedur.getDiseaseIds().contains(DiagnoseId) && Prozedur.getFormName().contains(dataForm)) {
- // alle Werte auslesen
- Map<String, Item> Werte = Prozedur.getAllValues();
- Map<String, Object> Values = new HashMap<>();
- for (Map.Entry<String, Item> WerteListe: Werte.entrySet()) {
- Values.put(WerteListe.getKey(), WerteListe.getValue());
-// System.out.println(WerteListe.getKey() + ": " + WerteListe.getValue());
- }
- Map<String, Object> Formular = new HashMap<>();
- Formular.put("Formular", Prozedur.getFormName());
- Formular.put("Felder", Values);
- Formulare.add(Formular);
- }
- }
- ObjectMapper Obj = new ObjectMapper();
- try {
- jsonStr = Obj.writeValueAsString(Formulare);
- } catch (JsonProcessingException e) {
- // TODO Auto-generated catch block
- e.printStackTrace();
- }
- return jsonStr;
- }
-
- public Object getEmpfehlung(final Map<String, Object> input) {
- // Auslesen der Parameter aus 'input'
- int ProcedureID = (int) input.get("ProcedureID");
-
- String sql;
- try {
- SessionFactory sessionFactory = onkostarApi.getSessionFactory();
- Session session = sessionFactory.getCurrentSession();
- try {
- sql = "SELECT * FROM prozedur "
- + "LEFT JOIN dk_mtb_einzelempfehlung em ON em.id = prozedur.id "
- + "WHERE prozedur.hauptprozedur_id = " + ProcedureID + " AND prozedur.geloescht = 0 AND prozedur.data_form_id = 489 "
- + "ORDER BY beginndatum";
-
- SQLQuery query = session.createSQLQuery(sql)
- .addScalar("id", StandardBasicTypes.STRING)
- .addScalar("genname", StandardBasicTypes.STRING)
- .addScalar("geneid", StandardBasicTypes.STRING)
- .addScalar("geneidlink", StandardBasicTypes.STRING)
- .addScalar("empfehlung", StandardBasicTypes.STRING)
- .addScalar("beginndatum", StandardBasicTypes.STRING);
-
- @SuppressWarnings("unchecked")
- List<String[]> rows = query.list();
- return rows;
- } catch (Exception e) {
- return null;
- }
- } catch (Exception e) {
- return null;
- }
- }
-
- public Object updateEmpfehlungPrio(final Map<String, Object> input) {
- // Auslesen der Parameter aus 'input'
- //int rid = (int) input.get("rid");
- Object rid = input.get("rid");
- Object strDate = input.get("bd");
- SQLQuery result = null;
-
- //String strD = strDate.toString();
- //String CompareDate = strD.substring(1, 11);
-
- //DateFormat simpleDateFormat=new SimpleDateFormat("yyyy-MM-dd");
-
- String sql;
-
- try {
- sql = "UPDATE prozedur SET beginndatum = '"+ strDate +"' WHERE id = '"+ rid +"' ";
- result = onkostarApi.getSessionFactory().getCurrentSession().createSQLQuery(sql);
- result.executeUpdate();
- return true;
-
- } catch (Exception e) {
- return "Achtung: Ein Fehler ist aufgetreten, Änderung konnte nicht gespeichert werden!";
- //return null;
- }
-
- }
-} \ No newline at end of file