diff options
Diffstat (limited to 'DNPMPlugins')
20 files changed, 0 insertions, 1530 deletions
diff --git a/DNPMPlugins/pom.xml b/DNPMPlugins/pom.xml deleted file mode 100644 index 814d865..0000000 --- a/DNPMPlugins/pom.xml +++ /dev/null @@ -1,167 +0,0 @@ -<project xmlns="http://maven.apache.org/POM/4.0.0" - xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" - xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd"> - <modelVersion>4.0.0</modelVersion> - <groupId>DNPMHelper</groupId> - <artifactId>DNPMHelper</artifactId> - <version>0.0.2</version> - <name>DNPMHelper</name> - - <dependencies> - <!-- This is the onkostar-api --> - <dependency> - <groupId>de.itc</groupId> - <artifactId>onkostar-parent</artifactId> - <version>2.11.1.1</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/onkostar-api-2.11.1.1.jar</systemPath> - </dependency> - - <!-- This is the core HAPI library --> - <dependency> - <groupId>ca.uhn.hapi</groupId> - <artifactId>hapi-base</artifactId> - <version>2.2</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/hapi-base-2.2.jar</systemPath> - </dependency> - - <!-- This is the structure JAR for HL7 v2.1 --> - <dependency> - <groupId>ca.uhn.hapi</groupId> - <artifactId>hapi-structures-v23</artifactId> - <version>2.2</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/hapi-structures-v23-2.2.jar</systemPath> - </dependency> - <dependency> - <groupId>ca.uhn.hapi</groupId> - <artifactId>hapi-structures-v24</artifactId> - <version>2.2</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/hapi-structures-v24-2.2.jar</systemPath> - </dependency> - <dependency> - <groupId>ca.uhn.hapi</groupId> - <artifactId>hapi-structures-v25</artifactId> - <version>2.2</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/hapi-structures-v25-2.2.jar</systemPath> - </dependency> - <dependency> - <groupId>ca.uhn.hapi</groupId> - <artifactId>hapi-structures-v26</artifactId> - <version>2.2</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/hapi-structures-v26-2.2.jar</systemPath> - </dependency> - <dependency> - <groupId>org.springframework</groupId> - <artifactId>spring-beans</artifactId> - <version>4.3.8.RELEASE</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/spring-beans-4.3.8.RELEASE.jar</systemPath> - </dependency> - - <!-- Hibernate --> - <dependency> - <groupId>org.hibernate</groupId> - <artifactId>hibernate-core</artifactId> - <version>5.1.8.Final</version> - <scope>system</scope> - <systemPath>${project.basedir}/libs/hibernate-core-5.1.8.Final.jar</systemPath> - </dependency> - - <!-- zusätzliche Erweiterungen. --> - <dependency> - <groupId>com.fasterxml.jackson.core</groupId> - <artifactId>jackson-databind</artifactId> - <version>2.10.1</version> - </dependency> - <dependency> - <groupId>org.springframework.boot</groupId> - <artifactId>spring-boot-starter-web</artifactId> - <version>2.2.1.RELEASE</version> - <scope>compile</scope> - </dependency> - <dependency> - <groupId>org.springframework</groupId> - <artifactId>spring-tx</artifactId> - <version>3.2.1.RELEASE</version> - </dependency> - <dependency> - <groupId>org.apache.logging.log4j</groupId> - <artifactId>log4j-api</artifactId> - <version>2.14.1</version> - </dependency> - <dependency> - <groupId>org.apache.logging.log4j</groupId> - <artifactId>log4j-core</artifactId> - <version>2.14.1</version> - </dependency> - <dependency> - <groupId>javax.xml.bind</groupId> - <artifactId>jaxb-api</artifactId> - <version>2.3.0</version> - <scope>provided</scope> - </dependency> - <dependency> - <groupId>org.springframework</groupId> - <artifactId>spring-jdbc</artifactId> - <version>5.3.14</version> - </dependency> - <dependency> - <groupId>org.apache.commons</groupId> - <artifactId>commons-csv</artifactId> - <version>1.2</version> - <scope>provided</scope> - </dependency> - <dependency> - <groupId>commons-lang</groupId> - <artifactId>commons-lang</artifactId> - <version>2.6</version> - <scope>provided</scope> - </dependency> - </dependencies> - - <!-- Hier wird definiert, wie Maven das Artifakt bauen soll. --> - <!-- Das erste Plugin kopiert die Resourcen in das JAR --> - <!-- Das zweite Plugin kompiliert die Klassen als Java 11 --> - <build> - <plugins> - <plugin> - <artifactId>maven-jar-plugin</artifactId> - <version>2.4</version> - <configuration> - <outputDirectory>C:\Onkostar-System\Onkostar\files\onkostar\plugins</outputDirectory> - </configuration> - <executions> - <execution> - <id>default-jar</id> - <phase>package</phase> - <goals> - <goal>jar</goal> - </goals> - </execution> - </executions> - </plugin> - <plugin> - <artifactId>maven-compiler-plugin</artifactId> - <version>3.8.1</version> - <configuration> - <source>11</source> - <target>11</target> - </configuration> - </plugin> - </plugins> - </build> - - <properties> - <maven.compiler.source>11</maven.compiler.source> - <maven.compiler.target>11</maven.compiler.target> - <java.version>11</java.version> - <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding> - - <spring-version>4.3.8.RELEASE</spring-version> - </properties> -</project>
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/AgentCode.java b/DNPMPlugins/src/main/java/ATCCodes/AgentCode.java deleted file mode 100644 index 04d6065..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/AgentCode.java +++ /dev/null @@ -1,15 +0,0 @@ -package ATCCodes; - -/** - * Common Agent Code definition - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -public interface AgentCode extends Comparable<AgentCode> { - String getCode(); - - String getName(); - - CodeSystem getSystem(); -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/AtcCode.java b/DNPMPlugins/src/main/java/ATCCodes/AtcCode.java deleted file mode 100644 index e8bf9f1..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/AtcCode.java +++ /dev/null @@ -1,51 +0,0 @@ -package ATCCodes; - -import java.util.Objects; - -/** - * ATC-Code as used in WHO XML file - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -public class AtcCode implements AgentCode { - - private final String code; - private final String name; - - public AtcCode(String code, String name) { - this.code = code; - this.name = name; - } - - public String getCode() { - return code; - } - - public String getName() { - return name; - } - - public CodeSystem getSystem() { - return CodeSystem.ATC; - } - - @Override - public int compareTo(final AgentCode agentCode) { - return this.name.toLowerCase().compareTo(agentCode.getName().toLowerCase()); - } - - @Override - public boolean equals(final Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - AgentCode otherAgentCode = (AgentCode) o; - return Objects.equals(code.toLowerCase(), otherAgentCode.getCode().toLowerCase()) - && Objects.equals(name.toLowerCase(), otherAgentCode.getName().toLowerCase()); - } - - @Override - public int hashCode() { - return Objects.hash(code.toLowerCase(), name.toLowerCase()); - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/AtcCodesPlugin.java b/DNPMPlugins/src/main/java/ATCCodes/AtcCodesPlugin.java deleted file mode 100644 index d0077ae..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/AtcCodesPlugin.java +++ /dev/null @@ -1,110 +0,0 @@ -package ATCCodes; - -import de.itc.onkostar.api.Disease; -import de.itc.onkostar.api.Procedure; -import de.itc.onkostar.api.analysis.AnalyzerRequirement; -import de.itc.onkostar.api.analysis.IProcedureAnalyzer; -import de.itc.onkostar.api.analysis.OnkostarPluginType; -import ATCCodes.services.AgentCodeService; -import org.springframework.stereotype.Component; - -import java.util.ArrayList; -import java.util.List; -import java.util.Map; -import java.util.stream.Collectors; - -/** - * Plugin implementation - * Provides methods exposed to Onkostar - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -@Component -public class AtcCodesPlugin implements IProcedureAnalyzer { - - private final List<AgentCodeService> agentCodeServices; - - public AtcCodesPlugin(List<AgentCodeService> agentCodeServices) { - this.agentCodeServices = agentCodeServices; - } - - @Override - public OnkostarPluginType getType() { - return OnkostarPluginType.BACKEND_SERVICE; - } - - @Override - public String getVersion() { - return "0.4.0"; - } - - @Override - public String getName() { - return "ATC-Codes und Substanzen"; - } - - @Override - public String getDescription() { - return "ATC-Codes und Substanzen"; - } - - @Override - public boolean isSynchronous() { - return false; - } - - @Override - public AnalyzerRequirement getRequirement() { - return AnalyzerRequirement.PROCEDURE; - } - - @Override - public boolean isRelevantForDeletedProcedure() { - return false; - } - - @Override - public boolean isRelevantForAnalyzer(final Procedure procedure, final Disease disease) { - return false; - } - - @Override - public void analyze(final Procedure procedure, final Disease disease) { - // Nothing to do - should never be called - } - - /** - * Return list with ATC codes and agents. - * Usage in script: - * - * <pre> - * executePluginMethod( - * 'AtcCodesPlugin', - * 'query', - * { q: '', size: 10 }, - * function (result) {console.log(result);}, - * false - * ); - * </pre> - * - * @param input The data Map - * @return The result list filtered by input - */ - public List<AgentCode> query(final Map<String, Object> input) { - String query = ""; - if (null != input.get("q")) { - query = input.get("q").toString(); - } - - int size = Integer.parseInt(input.get("size").toString()); - if (size == 0) { - size = 10; - } - var result = new ArrayList<AgentCode>(); - for (var agentCodeService : this.agentCodeServices) { - result.addAll(agentCodeService.findAgentCodes(query, size)); - } - return result.stream().distinct().sorted().collect(Collectors.toList()); - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/CodeSystem.java b/DNPMPlugins/src/main/java/ATCCodes/CodeSystem.java deleted file mode 100644 index ea20f49..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/CodeSystem.java +++ /dev/null @@ -1,12 +0,0 @@ -package ATCCodes; - -/** - * This enum provides usable coding systems - * - * @author Paul-Christion Volkmer - * @since 0.1.0 - */ -public enum CodeSystem { - ATC, - UNREGISTERED -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/FileParsingException.java b/DNPMPlugins/src/main/java/ATCCodes/FileParsingException.java deleted file mode 100644 index b009578..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/FileParsingException.java +++ /dev/null @@ -1,14 +0,0 @@ -package ATCCodes; - -/** - * Exception to be thrown if any file parsing error occurs - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -public class FileParsingException extends RuntimeException { - - public FileParsingException(final String msg) { - super(msg); - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/UnregisteredCode.java b/DNPMPlugins/src/main/java/ATCCodes/UnregisteredCode.java deleted file mode 100644 index 345b057..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/UnregisteredCode.java +++ /dev/null @@ -1,51 +0,0 @@ -package ATCCodes; - -import java.util.Objects; - -/** - * Unregistered code as used in Onkostar database - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -public class UnregisteredCode implements AgentCode { - - private final String code; - private final String name; - - public UnregisteredCode(String code, String name) { - this.code = code; - this.name = name; - } - - public String getCode() { - return code; - } - - public String getName() { - return name; - } - - public CodeSystem getSystem() { - return CodeSystem.UNREGISTERED; - } - - @Override - public int compareTo(final AgentCode agentCode) { - return this.name.toLowerCase().compareTo(agentCode.getName().toLowerCase()); - } - - @Override - public boolean equals(final Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - AgentCode otherAgentCode = (AgentCode) o; - return Objects.equals(code.toLowerCase(), otherAgentCode.getCode().toLowerCase()) - && Objects.equals(name.toLowerCase(), otherAgentCode.getName().toLowerCase()); - } - - @Override - public int hashCode() { - return Objects.hash(code.toLowerCase(), name.toLowerCase()); - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/services/AgentCodeService.java b/DNPMPlugins/src/main/java/ATCCodes/services/AgentCodeService.java deleted file mode 100644 index 8057008..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/services/AgentCodeService.java +++ /dev/null @@ -1,23 +0,0 @@ -package ATCCodes.services; - -import ATCCodes.AgentCode; - -import java.util.List; - -/** - * Common interface for agent code services - * - * @author Paul-Christian Volkmer - */ -public interface AgentCodeService { - - /** - * Queries source for agents with name and code starting with query string. - * If size is zero, all available results will be returned. - * - * @param query The query string - * @param size Maximal amount of responses - * @return A list with agent codes - */ - List<AgentCode> findAgentCodes(String query, int size); -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/services/CsvAtcCodeService.java b/DNPMPlugins/src/main/java/ATCCodes/services/CsvAtcCodeService.java deleted file mode 100644 index fa834e7..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/services/CsvAtcCodeService.java +++ /dev/null @@ -1,51 +0,0 @@ -package ATCCodes.services; - -import ATCCodes.AgentCode; -import ATCCodes.AtcCode; -import ATCCodes.FileParsingException; -import org.apache.commons.csv.CSVFormat; -import org.springframework.core.io.ResourceLoader; -import org.springframework.stereotype.Service; - -import java.io.IOException; -import java.io.InputStreamReader; -import java.util.ArrayList; -import java.util.List; - -/** - * Service to query for agent codes based on WHO xml file - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -@Service -public class CsvAtcCodeService extends FileBasedAgentCodeService { - - public CsvAtcCodeService(final ResourceLoader resourceLoader) { - super(resourceLoader); - } - - protected List<AgentCode> parseFile(final ResourceLoader resourceLoader) { - var result = new ArrayList<AgentCode>(); - var filename = getFilePath("atc.csv"); - try { - var inputStream = resourceLoader.getResource(filename).getInputStream(); - var parser = CSVFormat.RFC4180 - .withHeader() - .withSkipHeaderRecord() - .parse(new InputStreamReader(inputStream)); - for (var row : parser) { - if (!row.isMapped("CODE") || !row.isMapped("NAME")) { - throw new FileParsingException("No CSV column 'CODE' or 'NAME' found"); - } - result.add(new AtcCode(row.get("CODE"), row.get("NAME"))); - } - logger.info("Found CSV file for ATC-Codes."); - return result; - } catch (IOException | FileParsingException e) { - logger.warn("Error reading CSV file '{}' for ATC-Codes. Proceeding without data", filename); - } - return result; - } - -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/services/FileBasedAgentCodeService.java b/DNPMPlugins/src/main/java/ATCCodes/services/FileBasedAgentCodeService.java deleted file mode 100644 index 17ba389..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/services/FileBasedAgentCodeService.java +++ /dev/null @@ -1,63 +0,0 @@ -package ATCCodes.services; - -import ATCCodes.AgentCode; -import org.apache.commons.lang.SystemUtils; -import org.slf4j.Logger; -import org.slf4j.LoggerFactory; -import org.springframework.core.io.ResourceLoader; - -import java.util.ArrayList; -import java.util.List; -import java.util.stream.Collectors; - -/** - * Abstract {@link AgentCodeService} for use with files that will load information into memory - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -public abstract class FileBasedAgentCodeService implements AgentCodeService { - - protected final Logger logger = LoggerFactory.getLogger(this.getClass()); - - protected final List<AgentCode> codeList = new ArrayList<>(); - - FileBasedAgentCodeService(final ResourceLoader resourceLoader) { - this.codeList.addAll(parseFile(resourceLoader)); - } - - static String getFilePath(final String filename) { - String pluginPathPart = "onkostar/files/onkostar/plugins/onkostar-plugin-atccodes"; - - if (SystemUtils.IS_OS_WINDOWS) { - return String.format("file:///c:/%s/%s", pluginPathPart, filename); - } else if (SystemUtils.IS_OS_LINUX) { - return String.format("file:///opt/%s/%s", pluginPathPart, filename); - } - return filename; - } - - protected abstract List<AgentCode> parseFile(final ResourceLoader resourceLoader); - - /** - * Queries source for agents code starting with or name containing query string. - * If size is zero, all available results will be returned. - * - * @param query The query string - * @param size Maximal amount of responses - * @return A list with agent codes - */ - @Override - public List<AgentCode> findAgentCodes(final String query, final int size) { - var resultStream = this.codeList.stream().filter(agentCode -> - agentCode.getCode().toLowerCase().startsWith(query.toLowerCase()) - || agentCode.getName().toLowerCase().contains(query.toLowerCase()) - ); - - if (size > 0) { - return resultStream.limit(size).collect(Collectors.toList()); - } - return resultStream.collect(Collectors.toList()); - } - -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/services/OnkostarAgentCodeService.java b/DNPMPlugins/src/main/java/ATCCodes/services/OnkostarAgentCodeService.java deleted file mode 100644 index f29f074..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/services/OnkostarAgentCodeService.java +++ /dev/null @@ -1,54 +0,0 @@ -package ATCCodes.services; - -import ATCCodes.AgentCode; -import ATCCodes.UnregisteredCode; -import org.springframework.jdbc.core.JdbcTemplate; -import org.springframework.stereotype.Service; - -import javax.sql.DataSource; -import java.util.List; - -/** - * Implementation of {@link AgentCodeService} that uses database to query for unregistered agents - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -@Service -public class OnkostarAgentCodeService implements AgentCodeService { - - private final JdbcTemplate jdbcTemplate; - - public OnkostarAgentCodeService(final DataSource dataSource) { - this.jdbcTemplate = new JdbcTemplate(dataSource); - } - - /** - * Queries source for agents code starting with or name containing query string. - * If size is zero, all available results will be returned. - * - * @param query The query string - * @param size Maximal amount of responses - * @return A list with agent codes - */ - @Override - public List<AgentCode> findAgentCodes(final String query, final int size) { - var sql = "SELECT code, shortdesc\n" + - " FROM property_catalogue\n" + - " JOIN property_catalogue_version ON (property_catalogue_version.datacatalog_id = property_catalogue.id)\n" + - " JOIN property_catalogue_version_entry p ON (p.property_version_id = property_catalogue_version.id)\n" + - " WHERE name = 'OS.Substanzen'\n" + - " AND (LOWER(code) LIKE ? OR LOWER(shortdesc) LIKE ? OR LOWER(synonyms) LIKE ?)"; - - if (size > 0) { - sql = sql + " LIMIT " + size; - } - - return jdbcTemplate.query( - sql, - new Object[]{query + "%", "%" + query + "%", "%" + query + "%"}, - (resultSet, i) -> - new UnregisteredCode(resultSet.getString("code"), resultSet.getString("shortdesc")) - ); - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/ATCCodes/services/WhoAtcCodeService.java b/DNPMPlugins/src/main/java/ATCCodes/services/WhoAtcCodeService.java deleted file mode 100644 index 5bb9b11..0000000 --- a/DNPMPlugins/src/main/java/ATCCodes/services/WhoAtcCodeService.java +++ /dev/null @@ -1,72 +0,0 @@ -package ATCCodes.services; - -import ATCCodes.AgentCode; -import ATCCodes.AtcCode; -import ATCCodes.FileParsingException; -import org.springframework.core.io.ResourceLoader; -import org.springframework.stereotype.Service; - -import javax.xml.bind.JAXBContext; -import javax.xml.bind.JAXBException; -import javax.xml.bind.annotation.XmlAttribute; -import javax.xml.bind.annotation.XmlElement; -import javax.xml.bind.annotation.XmlRootElement; -import java.io.IOException; -import java.util.ArrayList; -import java.util.List; - -/** - * Service to query for agent codes based on WHO xml file - * - * @author Paul-Christian Volkmer - * @since 0.1.0 - */ -@Service -public class WhoAtcCodeService extends FileBasedAgentCodeService { - - public WhoAtcCodeService(final ResourceLoader resourceLoader) { - super(resourceLoader); - } - - protected List<AgentCode> parseFile(final ResourceLoader resourceLoader) { - var result = new ArrayList<AgentCode>(); - var filename = getFilePath("atc.xml"); - try { - var inputStream = resourceLoader.getResource(filename).getInputStream(); - var context = JAXBContext.newInstance(XmlResource.class); - var xmlResource = (XmlResource) context.createUnmarshaller().unmarshal(inputStream); - for (var row : xmlResource.data.rows) { - if (null == row.code || null == row.name) { - throw new FileParsingException("No XML attribute 'ATCCode' or 'Name' found"); - } - result.add(new AtcCode(row.code, row.name)); - } - logger.info("Found WHO XML file for ATC-Codes."); - return result; - } catch (IOException e) { - logger.warn("Error reading WHO XML file '{}' for ATC-Codes. Proceeding without inserting data", filename); - } catch (JAXBException | FileParsingException e) { - logger.warn("Error parsing WHO XML file '{}' for ATC-Codes. Proceeding without inserting data", filename); - } - return result; - } - - @XmlRootElement(name = "xml") - private static class XmlResource { - @XmlElement(name = "data", namespace = "urn:schemas-microsoft-com:rowset") - public XmlData data; - } - - private static class XmlData { - @XmlElement(name = "row", namespace = "#RowsetSchema") - public List<XmlRow> rows; - } - - private static class XmlRow { - @XmlAttribute(name = "ATCCode") - public String code; - - @XmlAttribute(name = "Name") - public String name; - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/DNPM/ConsentManager.java b/DNPMPlugins/src/main/java/DNPM/ConsentManager.java deleted file mode 100644 index d6b9994..0000000 --- a/DNPMPlugins/src/main/java/DNPM/ConsentManager.java +++ /dev/null @@ -1,151 +0,0 @@ -package DNPM; - -import java.util.List; -import java.util.Map; - -import org.hibernate.SQLQuery; -import org.hibernate.Session; -import org.hibernate.SessionFactory; -import org.hibernate.transform.Transformers; -import org.hibernate.type.StandardBasicTypes; -import org.springframework.beans.factory.annotation.Autowired; - -import de.itc.onkostar.api.Disease; -import de.itc.onkostar.api.IOnkostarApi; -import de.itc.onkostar.api.Item; -import de.itc.onkostar.api.Procedure; -import de.itc.onkostar.api.analysis.AnalyzerRequirement; -import de.itc.onkostar.api.analysis.IProcedureAnalyzer; -import de.itc.onkostar.api.analysis.OnkostarPluginType; - -public class ConsentManager implements IProcedureAnalyzer { - - @Autowired - private IOnkostarApi onkostarApi; - - @Override - public String getDescription() { - return "Aktualisiert Consent Daten in verknüpften Formularen"; - } - - @Override - public String getName() { - return "Consent Manager"; - } - - @Override - public AnalyzerRequirement getRequirement() { - return AnalyzerRequirement.PROCEDURE; - } - - @Override - public OnkostarPluginType getType() { - return OnkostarPluginType.ANALYZER; - } - - @Override - public String getVersion() { - return "1"; - } - - @Override - public boolean isRelevantForAnalyzer(Procedure Prozedur, Disease Erkrankung) { - return Prozedur.getFormName().equals(onkostarApi.getGlobalSetting("consentform")); - } - - @Override - public boolean isRelevantForDeletedProcedure() { - // TODO is relevant for deleted procedure = true - return false; - } - - @Override - public boolean isSynchronous() { - return true; - } - - @Override - public void analyze(Procedure Prozedur, Disease Erkrankung) { - int value = 0; - try { - SessionFactory sessionFactory = onkostarApi.getSessionFactory(); - Session session = sessionFactory.getCurrentSession(); - // geänderte Werte checken - String sql1 = "select id, max(timestamp) AS datum from aenderungsprotokoll where entity_id = '" + Prozedur.getId() + "'"; - SQLQuery query1 = session.createSQLQuery(sql1) - .addScalar("id", StandardBasicTypes.INTEGER) - .addScalar("datum", StandardBasicTypes.TIMESTAMP); - System.out.println(query1.uniqueResult().toString()); - - try { - String sql = "SELECT prozedur.id AS procedure_id, prozedur.data_form_id, data_catalogue.name AS data_catalogue, data_catalogue_entry.name AS data_catalogue_entry, data_form.description AS formname, prozedur.beginndatum AS datum " + - "FROM prozedur " + - "LEFT JOIN data_form_data_catalogue ON data_form_data_catalogue.data_form_id = prozedur.data_form_id " + - "LEFT JOIN data_catalogue_entry ON data_catalogue_entry.data_catalogue_id = data_form_data_catalogue.data_catalogue_id " + - "LEFT JOIN data_catalogue ON data_catalogue.id = data_catalogue_entry.data_catalogue_id " + - "LEFT JOIN data_form ON data_form.id = prozedur.data_form_id " + - "WHERE patient_id = " + Prozedur.getPatientId() + " " + - "AND geloescht = 0 " + - "AND data_catalogue_entry.type = 'formReference' " + - "GROUP BY prozedur.id, prozedur.data_form_id, data_catalogue.name, data_catalogue_entry.name"; - - SQLQuery query = session.createSQLQuery(sql) - .addScalar("procedure_id", StandardBasicTypes.INTEGER) - .addScalar("data_form_id", StandardBasicTypes.INTEGER) - .addScalar("data_catalogue", StandardBasicTypes.STRING) - .addScalar("data_catalogue_entry", StandardBasicTypes.STRING) - .addScalar("formname", StandardBasicTypes.STRING) - .addScalar("datum", StandardBasicTypes.DATE); - - query.setResultTransformer(Transformers.aliasToBean(VerweisVon.class)); - List<VerweisVon> result = query.list(); - try { - for (VerweisVon var : result) { - sql = var.getSQL(); - query = session.createSQLQuery(sql) - .addScalar("value", StandardBasicTypes.INTEGER); - if (query.uniqueResult() != null) { - value = (Integer)query.uniqueResult(); - } - if (value == Prozedur.getId()) { - Procedure andereprozedur = onkostarApi.getProcedure(var.getProcedure_id()); - try { - Map<String, Item> Felder = Prozedur.getAllValues(); - for (Map.Entry<String, Item> Feld: Felder.entrySet()) { - if (Feld.getKey().length() > 6 && Feld.getKey().substring(0, 7).equals("Consent")) { - if (Feld.getKey().equals("ConsentStatusEinwilligungDNPM")) { - switch (Feld.getValue().getValue().toString()) { - case "z": - andereprozedur.setValue(Feld.getKey(), new Item(Feld.getKey(), "active")); - break; - case "a": - andereprozedur.setValue(Feld.getKey(), new Item(Feld.getKey(), "rejected")); - break; - case "w": - andereprozedur.setValue(Feld.getKey(), new Item(Feld.getKey(), "rejected")); - break; - } - } else { - andereprozedur.setValue(Feld.getKey(), Prozedur.getValue(Feld.getKey())); - } - } - } - onkostarApi.saveProcedure(andereprozedur); - } catch (Exception e) { - e.printStackTrace(); - } - value = 0; - } - } - } catch (Exception e) { - e.printStackTrace(); - } - } catch (Exception e) { - System.out.println(e.getMessage()); - } - } catch (Exception e) { - System.out.println(e.getMessage()); - } - } - -} diff --git a/DNPMPlugins/src/main/java/DNPM/DNPMHelper.java b/DNPMPlugins/src/main/java/DNPM/DNPMHelper.java deleted file mode 100644 index 408c262..0000000 --- a/DNPMPlugins/src/main/java/DNPM/DNPMHelper.java +++ /dev/null @@ -1,315 +0,0 @@ -package DNPM; - -import java.util.ArrayList; -import java.util.Arrays; -import java.util.HashMap; -import java.util.List; -import java.util.Map; -import org.hibernate.SQLQuery; -import org.hibernate.Session; -import org.hibernate.SessionFactory; -import org.hibernate.transform.Transformers; -import org.hibernate.type.StandardBasicTypes; -import org.springframework.beans.factory.annotation.Autowired; - -import com.fasterxml.jackson.core.JsonProcessingException; -import com.fasterxml.jackson.databind.ObjectMapper; - -import de.itc.onkostar.api.Disease; -import de.itc.onkostar.api.IOnkostarApi; -import de.itc.onkostar.api.Item; -import de.itc.onkostar.api.Procedure; - -import de.itc.onkostar.api.analysis.AnalyzerRequirement; -import de.itc.onkostar.api.analysis.IProcedureAnalyzer; -import de.itc.onkostar.api.analysis.OnkostarPluginType; - -public class DNPMHelper implements IProcedureAnalyzer{ - - // Laden der API - @Autowired - private IOnkostarApi onkostarApi; - - @Override - public OnkostarPluginType getType() { - // Typ des Plugins - // Für das Interface IProcedureAnalyzer gültig sind ANALYZER und BACKEND_SERVICE - return OnkostarPluginType.BACKEND_SERVICE; - } - - @Override - public String getVersion() { - return "1"; - } - - @Override - public String getName() { - return "UMR DNPM"; - } - - @Override - public String getDescription() { - return "Methoden für DNPM-Formulare"; - } - - @Override - public boolean isRelevantForDeletedProcedure() { - return false; - } - - @Override - public boolean isSynchronous() { - return true; - } - - @Override - public AnalyzerRequirement getRequirement() { - return AnalyzerRequirement.PROCEDURE; - } - - @Override - public boolean isRelevantForAnalyzer(Procedure entry, Disease currentDisease) { - // Plugin enthält nur Methoden für Formulare und soll nicht ausgeführt werden - return false; - } - - @Override - public void analyze(Procedure entry, Disease currentDisease) { - // wird nicht benötigt, da dass Plugin nicht ausgeführt wird - } - - @SuppressWarnings("unchecked") - public Object getVerweise(final Map<String, Object> input) { - int ProcedureId = (int) input.get("ProcedureId"); - int PatientId = (int) input.get("PatientId"); - int value = 0; - List<Map<String, String>> VerbundeneFormulare = new ArrayList<Map<String, String>>(); - - try { - SessionFactory sessionFactory = onkostarApi.getSessionFactory(); - Session session = sessionFactory.getCurrentSession(); - try { - String sql = "SELECT prozedur.id AS procedure_id, prozedur.data_form_id, data_catalogue.name AS data_catalogue, data_catalogue_entry.name AS data_catalogue_entry, data_form.description AS formname, prozedur.beginndatum AS datum " + - "FROM prozedur " + - "LEFT JOIN data_form_data_catalogue ON data_form_data_catalogue.data_form_id = prozedur.data_form_id " + - "LEFT JOIN data_catalogue_entry ON data_catalogue_entry.data_catalogue_id = data_form_data_catalogue.data_catalogue_id " + - "LEFT JOIN data_catalogue ON data_catalogue.id = data_catalogue_entry.data_catalogue_id " + - "LEFT JOIN data_form ON data_form.id = prozedur.data_form_id " + - "WHERE patient_id = " + PatientId + " " + - "AND geloescht = 0 " + - "AND data_catalogue_entry.type = 'formReference' " + - "GROUP BY prozedur.id, prozedur.data_form_id, data_catalogue.name, data_catalogue_entry.name"; - - SQLQuery query = session.createSQLQuery(sql) - .addScalar("procedure_id", StandardBasicTypes.INTEGER) - .addScalar("data_form_id", StandardBasicTypes.INTEGER) - .addScalar("data_catalogue", StandardBasicTypes.STRING) - .addScalar("data_catalogue_entry", StandardBasicTypes.STRING) - .addScalar("formname", StandardBasicTypes.STRING) - .addScalar("datum", StandardBasicTypes.DATE); - - query.setResultTransformer(Transformers.aliasToBean(VerweisVon.class)); - List<VerweisVon> result = query.list(); - try { - for (VerweisVon var : result) { - sql = var.getSQL(); - query = session.createSQLQuery(sql) - .addScalar("value", StandardBasicTypes.INTEGER); - if (query.uniqueResult() != null) { - value = (Integer)query.uniqueResult(); - } - if (value == ProcedureId) { - VerbundeneFormulare.add(Map.of("formular", var.getVerbundenesFormular())); - value = 0; - } - } - } catch (Exception e) { - // TODO Auto-generated catch block - e.printStackTrace(); - } - } catch (Exception e) { - return null; - } - } catch (Exception e) { - return null; - } - return VerbundeneFormulare; - } - - public Object getSystemischeTherapienFromDiagnose(final Map<String, Object> input) { - int DiagnoseId = (int) input.get("DiagnoseId"); - - String jsonStr = ""; - List<Object> Rueckgabewerte = new ArrayList<Object>(); - List<Procedure> Prozeduren = onkostarApi.getProceduresForDiseaseByForm(DiagnoseId, "OS.Systemische Therapie"); - // für jede Prozedur - for (Procedure Prozedur : Prozeduren) { - String Beginn = new String(); - String Ende = new String(); - String Wirkstoffe = new String(); - String Beendigung = new String(); - String Ergebnis = new String(); - - // SubstanzenCodesListe enthält die Liste der SubstanzenCodes - List<Map<String, String>> SubstanzenCodesListe = new ArrayList<Map<String, String>>(); - - // alle Werte der Prozedur auslesen - Map<String, Item> alleWerte = Prozedur.getAllValues(); - // Prozedurwerte enthält nur die interessanten Werte - Map<String, Object> Prozedurwerte = new HashMap<>(); - // alle Werte durchgehen und die interessanten übernehmen - for (Map.Entry<String, Item> WerteListe : alleWerte.entrySet()) { - // Datum des Hauptformulars merken - if (WerteListe.getKey().equals("Beendigung")) { - Beendigung = WerteListe.getValue().getValue(); - } - if (WerteListe.getKey().equals("Ergebnis")) { - Ergebnis = WerteListe.getValue().getValue(); - } - if (WerteListe.getKey().equals("Beginn")) { - Beginn = WerteListe.getValue().getString();// + "," + WerteListe.getValue().getDateAccuracy(); - } - if (WerteListe.getKey().equals("Ende")) { - Ende = WerteListe.getValue().getString();// + "," + WerteListe.getValue().getDateAccuracy(); - } - // im Subformular (SubstanzenList) Substanzen auslesen - if (WerteListe.getKey().equals("SubstanzenList")) { - int Index = -1; - // SubstanzenCodesListe enthält die Liste der SubstanzenCodes eines Subformulars - ArrayList<Map<String, Map<String, String>>> Subformular = new ArrayList<>(); - Subformular = WerteListe.getValue().getValue(); - // Werte aus Subformular verarbeiten - for (Map<String, Map<String, String>> SubformularWerte: Subformular) { - - // SubstanzenCodes enthält den Code und den Namen einer Substanz - Map<String, String> SubstanzenCodes = new HashMap<String, String>(); - // Index des Codes (Substanz) - Index = Arrays.asList((SubformularWerte.keySet().toArray())).indexOf("Substanz"); - if (SubformularWerte.values().toArray()[Index].toString().matches("[A-V]0[1-9][A-Z]{2}[0-9]{0,2}")) { - SubstanzenCodes.put("system", "ATC"); - } else { - SubstanzenCodes.put("system", "other"); - } - - SubstanzenCodes.put("code", (String) SubformularWerte.values().toArray()[Index]); - // Index der Substanz (Substanz_shortDescription) - Index = Arrays.asList((SubformularWerte.keySet().toArray())).indexOf("Substanz_shortDescription"); - SubstanzenCodes.put("substance", (String) SubformularWerte.values().toArray()[Index]); - SubstanzenCodesListe.add(SubstanzenCodes); - Wirkstoffe = Wirkstoffe + (String) SubformularWerte.values().toArray()[Index] + ", "; - } - } - } - ObjectMapper Obj = new ObjectMapper(); - try { - jsonStr = Obj.writeValueAsString(SubstanzenCodesListe); - } catch (JsonProcessingException e) { - // TODO Auto-generated catch block - e.printStackTrace(); - } - Prozedurwerte.put("Beginn", Beginn); - Prozedurwerte.put("Ende", Ende); - Prozedurwerte.put("Beendigung", Beendigung); - Prozedurwerte.put("Ergebnis", Ergebnis); - Prozedurwerte.put("Wirkstoffe", Wirkstoffe.substring(0, Wirkstoffe.length()-2)); - Prozedurwerte.put("WirkstoffCodes", jsonStr); - Rueckgabewerte.add(Prozedurwerte); - } - return Rueckgabewerte; - } - - public Object getProzedurenFromDiagnose(final Map<String, Object> input) { - String dataForm = (String) input.get("dataForm"); - int DiagnoseId = (int) input.get("DiagnoseId"); - int PatientId = (int) input.get("PatientId"); - // Prozedur, Feldname, Wert - - List<Object> Formulare = new ArrayList<Object>(); - String jsonStr = ""; - List<Procedure> Prozeduren = onkostarApi.getProceduresByPatientId(PatientId); - for (Procedure Prozedur: Prozeduren ) { - // Formular gehört zur aktuellen Diagnose und hat den angegebenen Namen - if (Prozedur.getDiseaseIds().contains(DiagnoseId) && Prozedur.getFormName().contains(dataForm)) { - // alle Werte auslesen - Map<String, Item> Werte = Prozedur.getAllValues(); - Map<String, Object> Values = new HashMap<>(); - for (Map.Entry<String, Item> WerteListe: Werte.entrySet()) { - Values.put(WerteListe.getKey(), WerteListe.getValue()); -// System.out.println(WerteListe.getKey() + ": " + WerteListe.getValue()); - } - Map<String, Object> Formular = new HashMap<>(); - Formular.put("Formular", Prozedur.getFormName()); - Formular.put("Felder", Values); - Formulare.add(Formular); - } - } - ObjectMapper Obj = new ObjectMapper(); - try { - jsonStr = Obj.writeValueAsString(Formulare); - } catch (JsonProcessingException e) { - // TODO Auto-generated catch block - e.printStackTrace(); - } - return jsonStr; - } - - public Object getEmpfehlung(final Map<String, Object> input) { - // Auslesen der Parameter aus 'input' - int ProcedureID = (int) input.get("ProcedureID"); - - String sql; - try { - SessionFactory sessionFactory = onkostarApi.getSessionFactory(); - Session session = sessionFactory.getCurrentSession(); - try { - sql = "SELECT * FROM prozedur " - + "LEFT JOIN dk_mtb_einzelempfehlung em ON em.id = prozedur.id " - + "WHERE prozedur.hauptprozedur_id = " + ProcedureID + " AND prozedur.geloescht = 0 AND prozedur.data_form_id = 489 " - + "ORDER BY beginndatum"; - - SQLQuery query = session.createSQLQuery(sql) - .addScalar("id", StandardBasicTypes.STRING) - .addScalar("genname", StandardBasicTypes.STRING) - .addScalar("geneid", StandardBasicTypes.STRING) - .addScalar("geneidlink", StandardBasicTypes.STRING) - .addScalar("empfehlung", StandardBasicTypes.STRING) - .addScalar("beginndatum", StandardBasicTypes.STRING); - - @SuppressWarnings("unchecked") - List<String[]> rows = query.list(); - return rows; - } catch (Exception e) { - return null; - } - } catch (Exception e) { - return null; - } - } - - public Object updateEmpfehlungPrio(final Map<String, Object> input) { - // Auslesen der Parameter aus 'input' - //int rid = (int) input.get("rid"); - Object rid = input.get("rid"); - Object strDate = input.get("bd"); - SQLQuery result = null; - - //String strD = strDate.toString(); - //String CompareDate = strD.substring(1, 11); - - //DateFormat simpleDateFormat=new SimpleDateFormat("yyyy-MM-dd"); - - String sql; - - try { - sql = "UPDATE prozedur SET beginndatum = '"+ strDate +"' WHERE id = '"+ rid +"' "; - result = onkostarApi.getSessionFactory().getCurrentSession().createSQLQuery(sql); - result.executeUpdate(); - return true; - - } catch (Exception e) { - return "Achtung: Ein Fehler ist aufgetreten, Änderung konnte nicht gespeichert werden!"; - //return null; - } - - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/java/DNPM/Merkmalskatalog.java b/DNPMPlugins/src/main/java/DNPM/Merkmalskatalog.java deleted file mode 100644 index 8160156..0000000 --- a/DNPMPlugins/src/main/java/DNPM/Merkmalskatalog.java +++ /dev/null @@ -1,98 +0,0 @@ -package DNPM; - -import java.util.List; -import java.util.Map; - -import org.hibernate.SQLQuery; -import org.hibernate.Session; -import org.hibernate.SessionFactory; -import org.hibernate.type.StandardBasicTypes; -import org.springframework.beans.factory.annotation.Autowired; - -import de.itc.onkostar.api.Disease; -import de.itc.onkostar.api.IOnkostarApi; -import de.itc.onkostar.api.Procedure; -import de.itc.onkostar.api.analysis.AnalyzerRequirement; -import de.itc.onkostar.api.analysis.IProcedureAnalyzer; -import de.itc.onkostar.api.analysis.OnkostarPluginType; - -public class Merkmalskatalog implements IProcedureAnalyzer{ - @Autowired - private IOnkostarApi onkostarApi; - - @Override - public OnkostarPluginType getType() { - return OnkostarPluginType.BACKEND_SERVICE; - } - - @Override - public String getVersion() { - return "1"; - } - - @Override - public String getName() { - return "UMR Merkmalskatalog"; - } - - @Override - public String getDescription() { - return "Methoden für Merkmalskataloge"; - } - - @Override - public boolean isRelevantForDeletedProcedure() { - return false; - } - - @Override - public boolean isSynchronous() { - return true; - } - - @Override - public AnalyzerRequirement getRequirement() { - return AnalyzerRequirement.PROCEDURE; - } - - @Override - public boolean isRelevantForAnalyzer(Procedure procedure, Disease currentDisease) { - return false; - } - - @Override - public void analyze(Procedure procedurea, Disease disease) {} - - public Object getMerkmalskatalog(final Map<String, Object> input) { - String Merkmalskatalog = (String) input.get("Merkmalskatalog"); - String Spalten = (String) input.get("Spalten"); - String[] SpaltenArray = Spalten.split("\\s*,\\s*"); - String sql; - try { - SessionFactory sessionFactory = onkostarApi.getSessionFactory(); - Session session = sessionFactory.getCurrentSession(); - try { - sql = "SELECT p.id, p.code, p.shortdesc, p.description, p.note, p.synonyms " - + "FROM property_catalogue " - + "LEFT JOIN property_catalogue_version ON property_catalogue_version.datacatalog_id = property_catalogue.id " - + "LEFT JOIN property_catalogue_version_entry p ON p.property_version_id = property_catalogue_version.id " - + "WHERE name = '" + Merkmalskatalog + "' AND aktiv = 1 " - + "ORDER BY position ASC"; - - SQLQuery query = session.createSQLQuery(sql); - - for (int i = 0; i < SpaltenArray.length; i++) { - query.addScalar(SpaltenArray[i], StandardBasicTypes.STRING); - } - - @SuppressWarnings("unchecked") - List<String[]> rows = query.list(); - return rows; - } catch (Exception e) { - return null; - } - } catch (Exception e) { - return null; - } - } -} diff --git a/DNPMPlugins/src/main/java/DNPM/VerweisVon.java b/DNPMPlugins/src/main/java/DNPM/VerweisVon.java deleted file mode 100644 index afb6824..0000000 --- a/DNPMPlugins/src/main/java/DNPM/VerweisVon.java +++ /dev/null @@ -1,54 +0,0 @@ -package DNPM; - -import java.text.SimpleDateFormat; -import java.util.Date; - -public class VerweisVon { - private int procedure_id; - private int data_form_id; - private String data_catalogue; - private String data_catalogue_entry; - private String formname; - private Date datum; - - public VerweisVon() { - } - - @SuppressWarnings("unused") - public int getProcedure_id() { return this.procedure_id; } - public int getData_form_id() { return this.data_form_id; } - public String getData_catalogue_name() { return this.data_catalogue; } - public String getData_catalogue_entry_name() { return this.data_catalogue_entry; } - public String getFormname() { return this.formname; } - public Date getDate() { return this.datum; } - public String getTable() { - return "dk_" + this.data_catalogue.toLowerCase().replaceAll("[^a-zA-Z0-9]", "_"); - } - public String getField() { - return this.data_catalogue_entry.toLowerCase(); - } - public String getSQL() { - return "SELECT " + this.getField() + " AS value FROM " + this.getTable() + " WHERE id = " + this.getProcedure_id(); - } - private String getDatumAsString() { - SimpleDateFormat DATE_FORMAT = new SimpleDateFormat("dd.MM.yyyy"); - String Datum = null; - if (this.getDate() != null) { - Datum = DATE_FORMAT.format(this.getDate()); - } - return Datum; - } - public String getVerbundenesFormular() { - String FName = "Formular " + this.getFormname(); - if (this.getDatumAsString() != null ) { FName += " vom " + this.getDatumAsString(); } - return FName; - } - - @SuppressWarnings("unused") - public void setProcedure_id(int procedure_id) {this.procedure_id = procedure_id; } - public void setData_form_id(int data_form_id) {this.data_form_id = data_form_id; } - public void setData_catalogue_name(String data_catalogue_name) {this.data_catalogue = data_catalogue_name; } - public void setData_catalogue_entry_name(String data_catalogue_entry) {this.data_catalogue_entry = data_catalogue_entry; } - public void setDate(Date datum) { this.datum = datum; } - public void setFormname(String formname) { this.formname = formname; } -} diff --git a/DNPMPlugins/src/main/java/DNPM/logger.java b/DNPMPlugins/src/main/java/DNPM/logger.java deleted file mode 100644 index 15dadb6..0000000 --- a/DNPMPlugins/src/main/java/DNPM/logger.java +++ /dev/null @@ -1,7 +0,0 @@ -package DNPM; - -public class logger { - public static void error (String messagetext) { - System.out.println(messagetext); - } -} diff --git a/DNPMPlugins/src/main/resources/app/lib/umr/FormUtils.js b/DNPMPlugins/src/main/resources/app/lib/umr/FormUtils.js deleted file mode 100644 index 7a8cbdd..0000000 --- a/DNPMPlugins/src/main/resources/app/lib/umr/FormUtils.js +++ /dev/null @@ -1,201 +0,0 @@ -class FormUtils { - - constructor(context) { - this.context = context; - - if (!this.context.genericEditForm) { - console.error('Context does not contain "genericEditForm". Please use "new FormUtils(this)" or methods will return undefined values!'); - } - } - - /** - * Returns field with given name from main form if it exists - * @param fieldName - * @returns {undefined|*} - */ - getMainformField(fieldName) { - if (this.context.genericEditForm) { - const query = '[originalName=' + fieldName + ']'; - const fields = this.context.genericEditForm - .query(query) - .filter(e => e.ownerCt.xtype === 'form' || e.ownerCt.xtype === 'panel' && e.ownerCt.title.length !== 0); - - if (fields.length > 0) { - return this.context.genericEditForm.down('#' + fields[0].id); - } - console.error('Field with name "' + fieldName + '" not found in main form!'); - } - return undefined; - } - - /** - * Returns field with given field name found at given index within whole form. - * @param fieldName - * @param index - * @returns {undefined|*} - */ - getFieldAtIndex(fieldName, index) { - if (this.context.genericEditForm) { - const query = '[originalName=' + fieldName + ']'; - const fields = this.context.genericEditForm.query(query); - if (fields.length > index) { - return this.context.genericEditForm.down('#' + fields[index].id); - } - console.error('Field with name "' + fieldName + '" and index "' + index + '" not found!'); - } - return undefined; - } - - /** - * Returns field with given field name found in section with given name. - * @param fieldName - * @param sectionName - * @returns {undefined|*} - */ - getFieldInSection(fieldName, sectionName) { - if (this.genericEditForm) { - const query = '[originalName=' + fieldName + ']'; - const fields = this.context.genericEditForm - .query(query) - .filter(e => e.ownerCt.xtype === 'panel' && e.ownerCt.ownerCt.originalName === sectionName); - if (fields.length > 0) { - return this.context.genericEditForm.down('#' + fields[0].id); - } - console.error('Field with name "' + fieldName + '" not found in section with name "' + sectionName + '"!'); - } - return undefined; - } - - /** - * Returns value of field with given name from main form if it exists. - * @param fieldName - * @returns {undefined|*} - */ - getMainformFieldValue(fieldName) { - let mainformField = this.getMainformField(fieldName); - if (mainformField) { - return mainformField.getValue(); - } - return undefined; - } - - /** - * Updates field with given name to given new value. - * The field must reside in main form. - * @param fieldName - * @param newValue - * @returns {undefined|*} - */ - setMainformFieldValue(fieldName, newValue) { - let mainformField = this.getMainformField(fieldName); - if (mainformField) { - return mainformField.setValue(newValue); - } - } - - /** - * Returns value of field with given name in section with given name if it exists. - * @param fieldName - * @param sectionName - * @returns {undefined|*} - */ - getFieldValueInSection(fieldName, sectionName) { - let sectionField = this.getFieldInSection(fieldName, sectionName); - if (sectionField) { - return sectionField.getValue(); - } - return undefined; - } - - /** - * Updates field with given name in section with given name new value. - * The field must reside in main form. - * @param fieldName - * @param sectionName - * @param newValue - * @returns {undefined|*} - */ - setFieldValueInSection(fieldName, sectionName, newValue) { - let sectionField = this.getFieldInSection(fieldName, sectionName); - if (sectionField) { - return sectionField.setValue(newValue); - } - } - - /** - * Returns value of field with given field name found at given index within whole form. - * @param fieldName - * @param index - * @returns {undefined|*} - */ - getFieldValueAtIndex(fieldName, index) { - let field = this.getFieldAtIndex(fieldName, index); - if (field) { - return field.getValue(); - } - return undefined; - } - - /** - * Updates value of field with given field name found at given index within whole form. - * @param fieldName - * @param index - * @param newValue - * @returns {undefined|*} - */ - setFieldValueAtIndex(fieldName, index, newValue) { - let field = this.getFieldAtIndex(fieldName, index); - if (field) { - field.setValue(newValue); - } - } - - /** - * Returns all values for all fields with given name. - * @param fieldName - * @returns {*|*[]} - */ - getFieldValues(fieldName) { - if (this.context.genericEditForm) { - const query = '[originalName=' + fieldName + ']'; - const fields = this.context.genericEditForm.query(query); - return fields.map(f => this.context.genericEditForm.down('#' + f.id).getValue()); - } - return undefined; - } - - /** - * Counts blocks within given subform field name. - * @param subformFieldName - * @returns {undefined|*|number} - */ - subformBlockCount(subformFieldName) { - if (this.context.genericEditForm) { - const query = '[originalName=' + subformFieldName + ']'; - const elements = this.context.genericEditForm.query(query); - - if (elements.length === 0) return 0; - - return elements - .map(e => e.numberOfBlocks) - .reduce((sum, num) => sum + num); - } - return undefined; - } - - /** - * Returns subform field names for given subform name. - * @param subformName - * @returns {undefined|*} - */ - getSubformFieldNames(subformName) { - if (this.context.genericEditForm) { - const query = '[formName=' + subformName + ']'; - - return Ext.ComponentQuery - .query(query) - .map(e => e.originalName); - } - return undefined; - } -}
\ No newline at end of file diff --git a/DNPMPlugins/src/main/resources/de/itc/onkostar/library/moduleContext.xml b/DNPMPlugins/src/main/resources/de/itc/onkostar/library/moduleContext.xml deleted file mode 100644 index efcde36..0000000 --- a/DNPMPlugins/src/main/resources/de/itc/onkostar/library/moduleContext.xml +++ /dev/null @@ -1,20 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<beans xmlns="http://www.springframework.org/schema/beans" - xmlns:context="http://www.springframework.org/schema/context" - xmlns:mvc="http://www.springframework.org/schema/mvc" - xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" - xmlns:tx="http://www.springframework.org/schema/tx" - xsi:schemaLocation=" - http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans-3.1.xsd - http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context-3.1.xsd - http://www.springframework.org/schema/mvc http://www.springframework.org/schema/mvc/spring-mvc-3.1.xsd - http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx-3.1.xsd"> - - <bean id="DNPMHelper" class="DNPM.DNPMHelper" /> - <bean id="Merkmalskatalog" class="DNPM.Merkmalskatalog" /> - <bean id="ConsentManager" class="DNPM.ConsentManager" /> - - <context:component-scan base-package="ATCCodes"/> - - <mvc:resources mapping="/app/lib/umr/**" location="classpath:/app/lib/umr/" /> -</beans>
\ No newline at end of file diff --git a/DNPMPlugins/src/main/resources/onkostar-config.properties b/DNPMPlugins/src/main/resources/onkostar-config.properties deleted file mode 100644 index b546687..0000000 --- a/DNPMPlugins/src/main/resources/onkostar-config.properties +++ /dev/null @@ -1 +0,0 @@ -onkostar-api=2.11.1.1
\ No newline at end of file |