summaryrefslogtreecommitdiff
path: root/src/main/java
diff options
context:
space:
mode:
Diffstat (limited to 'src/main/java')
-rw-r--r--src/main/java/DNPM/analyzer/DNPMHelper.java3
-rw-r--r--src/main/java/DNPM/analyzer/TherapieMitEcogAnalyzer.java (renamed from src/main/java/DNPM/analyzer/SystemtherapieAnalyzer.java)35
-rw-r--r--src/main/java/DNPM/dto/EcogStatusWithDate.java68
-rw-r--r--src/main/java/DNPM/services/TherapieMitEcogService.java30
-rw-r--r--src/main/java/DNPM/services/strahlentherapie/DefaultStrahlentherapieService.java74
-rw-r--r--src/main/java/DNPM/services/strahlentherapie/StrahlentherapieService.java10
-rw-r--r--src/main/java/DNPM/services/systemtherapie/DefaultSystemtherapieService.java1
-rw-r--r--src/main/java/DNPM/services/systemtherapie/SystemtherapieService.java60
8 files changed, 211 insertions, 70 deletions
diff --git a/src/main/java/DNPM/analyzer/DNPMHelper.java b/src/main/java/DNPM/analyzer/DNPMHelper.java
index 376333e..bb21fa0 100644
--- a/src/main/java/DNPM/analyzer/DNPMHelper.java
+++ b/src/main/java/DNPM/analyzer/DNPMHelper.java
@@ -1,5 +1,6 @@
package DNPM.analyzer;
+import DNPM.dto.EcogStatusWithDate;
import DNPM.VerweisVon;
import DNPM.security.DelegatingDataBasedPermissionEvaluator;
import DNPM.security.IllegalSecuredObjectAccessException;
@@ -237,7 +238,7 @@ public class DNPMHelper extends BackendService {
}
- public List<SystemtherapieService.EcogStatusWithDate> getEcogStatus(final Map<String, Object> input) {
+ public List<EcogStatusWithDate> getEcogStatus(final Map<String, Object> input) {
var pid = AnalyzerUtils.getRequiredId(input, "PatientId");
if (pid.isEmpty()) {
logger.error("Kein Parameter 'PatientId' angegeben, gebe leere Liste zurück");
diff --git a/src/main/java/DNPM/analyzer/SystemtherapieAnalyzer.java b/src/main/java/DNPM/analyzer/TherapieMitEcogAnalyzer.java
index f886f3d..46841e1 100644
--- a/src/main/java/DNPM/analyzer/SystemtherapieAnalyzer.java
+++ b/src/main/java/DNPM/analyzer/TherapieMitEcogAnalyzer.java
@@ -1,5 +1,7 @@
package DNPM.analyzer;
+import DNPM.dto.EcogStatusWithDate;
+import DNPM.services.strahlentherapie.StrahlentherapieService;
import DNPM.services.systemtherapie.SystemtherapieService;
import de.itc.onkostar.api.Disease;
import de.itc.onkostar.api.IOnkostarApi;
@@ -20,28 +22,31 @@ import java.util.stream.Collectors;
/**
* Diese Klasse implementiert ein Plugin, welches Aktionen nach Bearbeitung eines Formulars zur Systemtherapie durchführt.
*
- * @since 0.4.0
+ * @since 0.6.0
*/
@Component
-public class SystemtherapieAnalyzer extends Analyzer {
+public class TherapieMitEcogAnalyzer extends Analyzer {
private final Logger logger = LoggerFactory.getLogger(this.getClass());
private final IOnkostarApi onkostarApi;
+ private final StrahlentherapieService strahlentherapieService;
private final SystemtherapieService systemtherapieService;
- public SystemtherapieAnalyzer(
+ public TherapieMitEcogAnalyzer(
final IOnkostarApi onkostarApi,
+ final StrahlentherapieService strahlentherapieService,
final SystemtherapieService systemtherapieService
) {
this.onkostarApi = onkostarApi;
+ this.strahlentherapieService = strahlentherapieService;
this.systemtherapieService = systemtherapieService;
}
@Override
public String getDescription() {
- return "Aktualisiert verknüpfte Formulare nach Änderungen im Formularen vom Typ Systemtherapie";
+ return "Aktualisiert verknüpfte Formulare nach Änderungen in Formularen vom Typ Strahlen-/Systemtherapie mit ECOG-Status";
}
/**
@@ -55,7 +60,9 @@ public class SystemtherapieAnalyzer extends Analyzer {
@Override
public boolean isRelevantForAnalyzer(Procedure procedure, Disease disease) {
return null != procedure && null != disease && (
- procedure.getFormName().equals("OS.Systemische Therapie")
+ procedure.getFormName().equals("OS.Strahlentherapie")
+ || procedure.getFormName().equals("OS.Strahlentherapie.VarianteUKW")
+ || procedure.getFormName().equals("OS.Systemische Therapie")
|| procedure.getFormName().equals("OS.Systemische Therapie.VarianteUKW")
);
}
@@ -89,12 +96,18 @@ public class SystemtherapieAnalyzer extends Analyzer {
return;
}
- var ecogFromCompleted = systemtherapieService.ecogStatus(procedure.getPatient())
+ var ecog = strahlentherapieService.ecogStatus(procedure.getPatient())
.stream()
.filter(ecogStatusWithDate -> ecogStatusWithDate.getDate().after(disease.getDiagnosisDate()))
.collect(Collectors.toList());
- if (ecogFromCompleted.isEmpty()) {
+ ecog.addAll(systemtherapieService.ecogStatus(procedure.getPatient())
+ .stream()
+ .filter(ecogStatusWithDate -> ecogStatusWithDate.getDate().after(disease.getDiagnosisDate()))
+ .collect(Collectors.toList()));
+
+
+ if (ecog.isEmpty()) {
// Nothing to do
return;
}
@@ -104,14 +117,14 @@ public class SystemtherapieAnalyzer extends Analyzer {
.forEach(p -> {
var ufEcog = p.getValue("ECOGVerlauf");
if (null != ufEcog && ufEcog.getValue() instanceof List) {
- updateExistingEcogVerlauf(p, ecogFromCompleted, ufEcog);
+ updateExistingEcogVerlauf(p, ecog, ufEcog);
} else {
- newEcogverlauf(p, ecogFromCompleted);
+ newEcogverlauf(p, ecog);
}
});
}
- private void updateExistingEcogVerlauf(Procedure p, List<SystemtherapieService.EcogStatusWithDate> ecogFromCompleted, Item ufEcog) {
+ private void updateExistingEcogVerlauf(Procedure p, List<EcogStatusWithDate> ecogFromCompleted, Item ufEcog) {
var shouldSave = false;
var existingDates = ufEcog.<List<Map<String, String>>>getValue().stream()
.map(v -> v.get("Datum"))
@@ -136,7 +149,7 @@ public class SystemtherapieAnalyzer extends Analyzer {
}
}
- private void newEcogverlauf(Procedure p, List<SystemtherapieService.EcogStatusWithDate> ecogFromCompleted) {
+ private void newEcogverlauf(Procedure p, List<EcogStatusWithDate> ecogFromCompleted) {
p.setValue("ECOGVerlauf", new Item("ECOGVerlauf", List.of()));
for (var ecog : ecogFromCompleted) {
var newSubProcedure = new Procedure(onkostarApi);
diff --git a/src/main/java/DNPM/dto/EcogStatusWithDate.java b/src/main/java/DNPM/dto/EcogStatusWithDate.java
new file mode 100644
index 0000000..d48a3ff
--- /dev/null
+++ b/src/main/java/DNPM/dto/EcogStatusWithDate.java
@@ -0,0 +1,68 @@
+/*
+ * MIT License
+ *
+ * 2023 Comprehensive Cancer Center Mainfranken
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in all
+ * copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ * SOFTWARE.
+ */
+
+package DNPM.dto;
+
+import org.springframework.util.Assert;
+
+import java.util.Date;
+
+/**
+ * Datenklasse zum Abbilden des ECOG-Status und Datum
+ */
+public class EcogStatusWithDate {
+ private Date date;
+ private String status;
+
+ public EcogStatusWithDate(Date date, String status) {
+ Assert.notNull(date, "Date cannot be null");
+ Assert.hasText(status, "Status cannot be empty String");
+ Assert.isTrue(isValidEcogCode(status), "Not a valid ADT.LeistungszustandECOG code");
+ this.date = date;
+ this.status = status;
+ }
+
+ private boolean isValidEcogCode(String status) {
+ switch (status) {
+ case "0":
+ case "1":
+ case "2":
+ case "3":
+ case "4":
+ case "5":
+ case "U":
+ return true;
+ default:
+ return false;
+ }
+ }
+
+ public Date getDate() {
+ return date;
+ }
+
+ public String getStatus() {
+ return status;
+ }
+}
diff --git a/src/main/java/DNPM/services/TherapieMitEcogService.java b/src/main/java/DNPM/services/TherapieMitEcogService.java
new file mode 100644
index 0000000..e8cbae4
--- /dev/null
+++ b/src/main/java/DNPM/services/TherapieMitEcogService.java
@@ -0,0 +1,30 @@
+package DNPM.services;
+
+import DNPM.dto.EcogStatusWithDate;
+import de.itc.onkostar.api.Patient;
+
+import java.util.List;
+import java.util.Optional;
+
+/**
+ * Schnittstelle zum Ermitteln von ECOG-Statusinformationen
+ *
+ * @since 0.6.0
+ */
+public interface TherapieMitEcogService {
+
+ /**
+ * Ermittelt den letzten bekannten ECOG-Status aus allen Therapieformularen des Patienten
+ * @param patient Der zu verwendende Patient
+ * @return Der ECOG-Status als String oder leeres Optional
+ */
+ Optional<String> latestEcogStatus(Patient patient);
+
+ /**
+ * Ermittelt jeden bekannten ECOG-Status aus allen Therapieformularen des Patienten
+ * @param patient Der zu verwendende Patient
+ * @return Eine Liste mit Datum und ECOG-Status als String
+ */
+ List<EcogStatusWithDate> ecogStatus(Patient patient);
+
+}
diff --git a/src/main/java/DNPM/services/strahlentherapie/DefaultStrahlentherapieService.java b/src/main/java/DNPM/services/strahlentherapie/DefaultStrahlentherapieService.java
new file mode 100644
index 0000000..a318a81
--- /dev/null
+++ b/src/main/java/DNPM/services/strahlentherapie/DefaultStrahlentherapieService.java
@@ -0,0 +1,74 @@
+package DNPM.services.strahlentherapie;
+
+import DNPM.dto.EcogStatusWithDate;
+import DNPM.services.SettingsService;
+import de.itc.onkostar.api.IOnkostarApi;
+import de.itc.onkostar.api.Patient;
+import de.itc.onkostar.api.Procedure;
+
+import java.util.Comparator;
+import java.util.List;
+import java.util.Objects;
+import java.util.Optional;
+import java.util.stream.Collectors;
+
+/**
+ * Standardimplementierung des StrahlentherapieServices
+ *
+ * @since 0.6.0
+ */
+public class DefaultStrahlentherapieService implements StrahlentherapieService {
+
+ private static final String ECOG_FIELD = "ECOGvorTherapie";
+
+ private final IOnkostarApi onkostarApi;
+
+ private final SettingsService settingsService;
+
+ public DefaultStrahlentherapieService(final IOnkostarApi onkostarApi, final SettingsService settingsService) {
+ this.onkostarApi = onkostarApi;
+ this.settingsService = settingsService;
+ }
+
+ /**
+ * Ermittelt den letzten bekannten ECOG-Status aus allen Systemtherapieformularen des Patienten
+ *
+ * @param patient Der zu verwendende Patient
+ * @return Der ECOG-Status als String oder leeres Optional
+ */
+ @Override
+ public Optional<String> latestEcogStatus(Patient patient) {
+ return ecogStatus(patient).stream()
+ .max(Comparator.comparing(EcogStatusWithDate::getDate))
+ .map(EcogStatusWithDate::getStatus);
+ }
+
+ /**
+ * Ermittelt jeden bekannten ECOG-Status aus allen Systemtherapieformularen des Patienten
+ *
+ * @param patient Der zu verwendende Patient
+ * @return Eine Liste mit Datum und ECOG-Status als String
+ */
+ @Override
+ public List<EcogStatusWithDate> ecogStatus(Patient patient) {
+ return patient.getDiseases().stream()
+ .flatMap(disease -> onkostarApi.getProceduresForDiseaseByForm(disease.getId(), getFormName()).stream())
+ .filter(procedure -> null != procedure.getStartDate())
+ .sorted(Comparator.comparing(Procedure::getStartDate))
+ .map(procedure -> {
+ try {
+ return new EcogStatusWithDate(procedure.getStartDate(), procedure.getValue(ECOG_FIELD).getString());
+ } catch (IllegalArgumentException e) {
+ return null;
+ }
+ })
+ .filter(Objects::nonNull)
+ .collect(Collectors.toList());
+ }
+
+ private String getFormName() {
+ return settingsService
+ .getSetting("strahlentherapieform")
+ .orElse("OS.Strahlentherapie");
+ }
+}
diff --git a/src/main/java/DNPM/services/strahlentherapie/StrahlentherapieService.java b/src/main/java/DNPM/services/strahlentherapie/StrahlentherapieService.java
new file mode 100644
index 0000000..a8de923
--- /dev/null
+++ b/src/main/java/DNPM/services/strahlentherapie/StrahlentherapieService.java
@@ -0,0 +1,10 @@
+package DNPM.services.strahlentherapie;
+
+import DNPM.services.TherapieMitEcogService;
+
+/**
+ * Service für Systemtherapieformulare
+ *
+ * @since 0.6.0
+ */
+public interface StrahlentherapieService extends TherapieMitEcogService {}
diff --git a/src/main/java/DNPM/services/systemtherapie/DefaultSystemtherapieService.java b/src/main/java/DNPM/services/systemtherapie/DefaultSystemtherapieService.java
index 4b9c1a2..578613f 100644
--- a/src/main/java/DNPM/services/systemtherapie/DefaultSystemtherapieService.java
+++ b/src/main/java/DNPM/services/systemtherapie/DefaultSystemtherapieService.java
@@ -1,5 +1,6 @@
package DNPM.services.systemtherapie;
+import DNPM.dto.EcogStatusWithDate;
import DNPM.services.SettingsService;
import de.itc.onkostar.api.IOnkostarApi;
import de.itc.onkostar.api.Patient;
diff --git a/src/main/java/DNPM/services/systemtherapie/SystemtherapieService.java b/src/main/java/DNPM/services/systemtherapie/SystemtherapieService.java
index ea26c0c..a7ac1bd 100644
--- a/src/main/java/DNPM/services/systemtherapie/SystemtherapieService.java
+++ b/src/main/java/DNPM/services/systemtherapie/SystemtherapieService.java
@@ -1,20 +1,17 @@
package DNPM.services.systemtherapie;
-import de.itc.onkostar.api.Patient;
+import DNPM.services.TherapieMitEcogService;
import de.itc.onkostar.api.Procedure;
-import org.springframework.util.Assert;
-import java.util.Date;
import java.util.List;
import java.util.Map;
-import java.util.Optional;
/**
* Service für Systemtherapieformulare
*
* @since 0.2.0
*/
-public interface SystemtherapieService {
+public interface SystemtherapieService extends TherapieMitEcogService {
/**
* Ermittelt eine Zusammenfassung der systemischen Therapien für eine Erkrankung
* @param diseaseId Die ID der Erkrankung
@@ -29,57 +26,4 @@ public interface SystemtherapieService {
*/
ProzedurToProzedurwerteMapper prozedurToProzedurwerteMapper(Procedure procedure);
- /**
- * Ermittelt den letzten bekannten ECOG-Status aus allen Systemtherapieformularen des Patienten
- * @param patient Der zu verwendende Patient
- * @return Der ECOG-Status als String oder leeres Optional
- */
- Optional<String> latestEcogStatus(Patient patient);
-
- /**
- * Ermittelt jeden bekannten ECOG-Status aus allen Systemtherapieformularen des Patienten
- * @param patient Der zu verwendende Patient
- * @return Eine Liste mit Datum und ECOG-Status als String
- */
- List<EcogStatusWithDate> ecogStatus(Patient patient);
-
- /**
- * Datenklasse zum Abbilden des ECOG-Status und Datum
- */
- class EcogStatusWithDate {
- private Date date;
- private String status;
-
- public EcogStatusWithDate(Date date, String status) {
- Assert.notNull(date, "Date cannot be null");
- Assert.hasText(status, "Status cannot be empty String");
- Assert.isTrue(isValidEcogCode(status), "Not a valid ADT.LeistungszustandECOG code");
- this.date = date;
- this.status = status;
- }
-
- private boolean isValidEcogCode(String status) {
- switch (status) {
- case "0":
- case "1":
- case "2":
- case "3":
- case "4":
- case "5":
- case "U":
- return true;
- default:
- return false;
- }
- }
-
- public Date getDate() {
- return date;
- }
-
- public String getStatus() {
- return status;
- }
- }
-
}