From 84fb0d829832bf1628112376bba729422b169402 Mon Sep 17 00:00:00 2001 From: Paul-Christian Volkmer Date: Thu, 23 Oct 2025 11:08:10 +0200 Subject: refactor: change package name --- .../dnpm/analyzer/EinzelempfehlungAnalyzer.java | 158 --------------------- 1 file changed, 158 deletions(-) delete mode 100644 src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java (limited to 'src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java') diff --git a/src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java b/src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java deleted file mode 100644 index 876c7a0..0000000 --- a/src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java +++ /dev/null @@ -1,158 +0,0 @@ -/* - * This file is part of onkostar-plugin-dnpm - * - * Copyright (c) 2025 the original author or authors. - * - * Permission is hereby granted, free of charge, to any person obtaining a copy - * of this software and associated documentation files (the "Software"), to deal - * in the Software without restriction, including without limitation the rights - * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell - * copies of the Software, and to permit persons to whom the Software is - * furnished to do so, subject to the following conditions: - * - * The above copyright notice and this permission notice shall be included in all - * copies or substantial portions of the Software. - * - * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR - * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, - * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE - * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER - * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, - * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE - * SOFTWARE. - */ - -package dev.dnpm.analyzer; - -import dev.dnpm.dto.Studie; -import dev.dnpm.dto.Variant; -import dev.dnpm.security.PermissionType; -import dev.dnpm.security.PersonPoolBasedPermissionEvaluator; -import dev.dnpm.services.StudienService; -import dev.dnpm.services.molekulargenetik.MolekulargenetikFormService; -import de.itc.onkostar.api.Disease; -import de.itc.onkostar.api.IOnkostarApi; -import de.itc.onkostar.api.Procedure; -import de.itc.onkostar.api.analysis.AnalyzerRequirement; -import org.slf4j.Logger; -import org.slf4j.LoggerFactory; -import org.springframework.security.core.context.SecurityContextHolder; -import org.springframework.stereotype.Component; - -import java.util.List; -import java.util.Map; - -/** - * Diese Klasse implementiert ein Plugin, welches Funktionen für DNPM UF Einzelempfehlung bereitstellt. - * - * @since 0.2.0 - */ -@Component -public class EinzelempfehlungAnalyzer extends BackendService { - - private final static Logger logger = LoggerFactory.getLogger(EinzelempfehlungAnalyzer.class); - - private final IOnkostarApi onkostarApi; - - private final MolekulargenetikFormService molekulargenetikFormService; - - private final StudienService studienService; - - private final PersonPoolBasedPermissionEvaluator permissionEvaluator; - - public EinzelempfehlungAnalyzer( - final IOnkostarApi onkostarApi, - final StudienService studienService, - final MolekulargenetikFormService molekulargenetikFormService, - final PersonPoolBasedPermissionEvaluator permissionEvaluator - ) { - this.onkostarApi = onkostarApi; - this.studienService = studienService; - this.molekulargenetikFormService = molekulargenetikFormService; - this.permissionEvaluator = permissionEvaluator; - } - - @Override - public String getDescription() { - return "Stellt Funktionen zur Nutzung im Therapieplan-Unterformular für Einzelempfehlungen bereit"; - } - - /** - * @deprecated - */ - @Override - public boolean isRelevantForDeletedProcedure() { - return false; - } - - @Override - public boolean isRelevantForAnalyzer(Procedure procedure, Disease disease) { - return false; - } - - @Override - public boolean isSynchronous() { - return false; - } - - @Override - public AnalyzerRequirement getRequirement() { - return AnalyzerRequirement.PROCEDURE; - } - - public List getVariants(Map input) { - var procedureId = AnalyzerUtils.getRequiredId(input, "id"); - - if (procedureId.isEmpty()) { - return List.of(); - } - - var procedure = onkostarApi.getProcedure(procedureId.get()); - if (null == procedure) { - return List.of(); - } - - if (permissionEvaluator.hasPermission(SecurityContextHolder.getContext().getAuthentication(), procedure, PermissionType.READ)) { - return molekulargenetikFormService.getVariants(procedure); - } else { - logger.error("Security: No permission to access procedure '{}'", procedure.getId()); - return List.of(); - } - } - - /** - * Übergibt alle Studien, deren (Kurz-)Beschreibung oder NCT-Nummer den übergebenen Eingabewert q enthält - * - *

Wurde der Eingabewert nicht angegeben oder ist leer, werden alle Studien übergeben. - * - *

Beispiel zur Nutzung in einem Formularscript - * 

-     * executePluginMethod(
-     *   'TherapieplanAnalyzer',
-     *   'getStudien',
-     *   { q: 'NCT-12', inactive: true },
-     *   (response) => console.log(response),
-     *   false
-     * );
-     *
- * - * @param input Map mit Eingabewerten - * @return Liste mit Studien - */ - public List getStudien(Map input) { - var query = AnalyzerUtils.getRequiredValue(input, "q", String.class); - var inactive = AnalyzerUtils.getRequiredValue(input, "inactive", Boolean.class).orElse(false); - - if (query.isEmpty() || query.get().isBlank()) { - if (inactive) { - return studienService.findAll(); - } - return studienService.findActive(); - } - if (inactive) { - return studienService.findByQuery(query.get()); - } - return studienService.findActiveByQuery(query.get()); - } - -} -- cgit v1.2.3