Package dev.pcvolkmer.mv64e.model

Class Cnv.Builder

java.lang.Object

dev.pcvolkmer.mv64e.model.Cnv.Builder

Enclosing class:

Cnv

public static class Cnv.Builder
extends java.lang.Object

Constructor Summary

Constructors

Modifier	Constructor	Description
	Builder()
protected	Builder(Cnv instance)

Method Summary

Modifier and Type	Method	Description
Cnv	build()
Cnv.Builder	chromosome(Chromosome chromosome)
Cnv.Builder	cnA(java.math.BigDecimal cnA)
Cnv.Builder	cnB(java.math.BigDecimal cnB)
Cnv.Builder	copyNumberNeutralLoH(java.util.Set<Coding> copyNumberNeutralLoH)
Cnv.Builder	endRange(CnvEndRange endRange)
Cnv.Builder	externalIds(java.util.List<VariantExternalId> externalIds)
Cnv.Builder	id(java.lang.String id)
Cnv.Builder	localization(java.util.Set<BaseVariantLocalizationCoding> localization)
Cnv.Builder	patient(Reference patient)
Cnv.Builder	relativeCopyNumber(java.math.BigDecimal relativeCopyNumber)
Cnv.Builder	reportedAffectedGenes(java.util.Set<Coding> reportedAffectedGenes)
Cnv.Builder	reportedFocality(java.lang.String reportedFocality)
Cnv.Builder	startRange(CnvStartRange startRange)
java.lang.String	toString()
Cnv.Builder	totalCopyNumber(java.lang.Integer totalCopyNumber)
Cnv.Builder	type(CnvTypeCoding type)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

Builder

public Builder()

Builder

protected Builder(Cnv instance)

Method Detail

localization

public Cnv.Builder localization(java.util.Set<BaseVariantLocalizationCoding> localization)

reportedFocality

public Cnv.Builder reportedFocality(java.lang.String reportedFocality)

reportedAffectedGenes

public Cnv.Builder reportedAffectedGenes(java.util.Set<Coding> reportedAffectedGenes)

totalCopyNumber

public Cnv.Builder totalCopyNumber(java.lang.Integer totalCopyNumber)

cnA

public Cnv.Builder cnA(java.math.BigDecimal cnA)

externalIds

public Cnv.Builder externalIds(java.util.List<VariantExternalId> externalIds)

startRange

public Cnv.Builder startRange(CnvStartRange startRange)

type

public Cnv.Builder type(CnvTypeCoding type)

patient

public Cnv.Builder patient(Reference patient)

endRange

public Cnv.Builder endRange(CnvEndRange endRange)

chromosome

public Cnv.Builder chromosome(Chromosome chromosome)

id

public Cnv.Builder id(java.lang.String id)

cnB

public Cnv.Builder cnB(java.math.BigDecimal cnB)

relativeCopyNumber

public Cnv.Builder relativeCopyNumber(java.math.BigDecimal relativeCopyNumber)

copyNumberNeutralLoH

public Cnv.Builder copyNumberNeutralLoH(java.util.Set<Coding> copyNumberNeutralLoH)

build

public Cnv build()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object