Package dev.pcvolkmer.mv64e.model

Class RnaFusion

java.lang.Object

dev.pcvolkmer.mv64e.model.RnaFusion

public class RnaFusion
extends java.lang.Object

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	RnaFusion.Builder

Field Summary

Fields

Modifier and Type	Field	Description
static java.lang.String	JSON_PROPERTY_EFFECT
static java.lang.String	JSON_PROPERTY_EXTERNAL_IDS
static java.lang.String	JSON_PROPERTY_FUSION_PARTNER3PRIME
static java.lang.String	JSON_PROPERTY_FUSION_PARTNER5PRIME
static java.lang.String	JSON_PROPERTY_ID
static java.lang.String	JSON_PROPERTY_LOCALIZATION
static java.lang.String	JSON_PROPERTY_PATIENT
static java.lang.String	JSON_PROPERTY_REPORTED_NUM_READS

Constructor Summary

Constructors

Constructor	Description
RnaFusion()

Method Summary

Modifier and Type	Method	Description
RnaFusion	addExternalIdsItem(VariantExternalId externalIdsItem)
RnaFusion	addLocalizationItem(BaseVariantLocalizationCoding localizationItem)
static RnaFusion.Builder	builder()
RnaFusion	effect(@Nullable java.lang.String effect)
boolean	equals(java.lang.Object o)
RnaFusion	externalIds(@Nullable java.util.List<VariantExternalId> externalIds)
RnaFusion	fusionPartner3prime(RnaFusionFusionPartner3prime fusionPartner3prime)
RnaFusion	fusionPartner5prime(RnaFusionFusionPartner5prime fusionPartner5prime)
@Nullable java.lang.String	getEffect()
@Nullable java.util.List<VariantExternalId>	getExternalIds()
RnaFusionFusionPartner3prime	getFusionPartner3prime()
RnaFusionFusionPartner5prime	getFusionPartner5prime()
java.lang.String	getId()
@Nullable java.util.Set<BaseVariantLocalizationCoding>	getLocalization()
Reference	getPatient()
java.lang.Integer	getReportedNumReads()
int	hashCode()
RnaFusion	id(java.lang.String id)
RnaFusion	localization(@Nullable java.util.Set<BaseVariantLocalizationCoding> localization)
RnaFusion	patient(Reference patient)
RnaFusion	reportedNumReads(java.lang.Integer reportedNumReads)
void	setEffect(@Nullable java.lang.String effect)
void	setExternalIds(@Nullable java.util.List<VariantExternalId> externalIds)
void	setFusionPartner3prime(RnaFusionFusionPartner3prime fusionPartner3prime)
void	setFusionPartner5prime(RnaFusionFusionPartner5prime fusionPartner5prime)
void	setId(java.lang.String id)
void	setLocalization(@Nullable java.util.Set<BaseVariantLocalizationCoding> localization)
void	setPatient(Reference patient)
void	setReportedNumReads(java.lang.Integer reportedNumReads)
RnaFusion.Builder	toBuilder()
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

JSON_PROPERTY_FUSION_PARTNER3PRIME

public static final java.lang.String JSON_PROPERTY_FUSION_PARTNER3PRIME

See Also:

Constant Field Values

JSON_PROPERTY_LOCALIZATION

public static final java.lang.String JSON_PROPERTY_LOCALIZATION

See Also:

Constant Field Values

JSON_PROPERTY_FUSION_PARTNER5PRIME

public static final java.lang.String JSON_PROPERTY_FUSION_PARTNER5PRIME

See Also:

Constant Field Values

JSON_PROPERTY_EFFECT

public static final java.lang.String JSON_PROPERTY_EFFECT

See Also:

Constant Field Values

JSON_PROPERTY_EXTERNAL_IDS

public static final java.lang.String JSON_PROPERTY_EXTERNAL_IDS

See Also:

Constant Field Values

JSON_PROPERTY_ID

public static final java.lang.String JSON_PROPERTY_ID

See Also:

Constant Field Values

JSON_PROPERTY_REPORTED_NUM_READS

public static final java.lang.String JSON_PROPERTY_REPORTED_NUM_READS

See Also:

Constant Field Values

JSON_PROPERTY_PATIENT

public static final java.lang.String JSON_PROPERTY_PATIENT

See Also:

Constant Field Values

Constructor Detail

RnaFusion

public RnaFusion()

Method Detail

fusionPartner3prime

public RnaFusion fusionPartner3prime(RnaFusionFusionPartner3prime fusionPartner3prime)

getFusionPartner3prime

public RnaFusionFusionPartner3prime getFusionPartner3prime()

setFusionPartner3prime

public void setFusionPartner3prime(RnaFusionFusionPartner3prime fusionPartner3prime)

localization

public RnaFusion localization(@Nullable java.util.Set<BaseVariantLocalizationCoding> localization)

addLocalizationItem

public RnaFusion addLocalizationItem(BaseVariantLocalizationCoding localizationItem)

getLocalization

public @Nullable java.util.Set<BaseVariantLocalizationCoding> getLocalization()

setLocalization

public void setLocalization(@Nullable java.util.Set<BaseVariantLocalizationCoding> localization)

fusionPartner5prime

public RnaFusion fusionPartner5prime(RnaFusionFusionPartner5prime fusionPartner5prime)

getFusionPartner5prime

public RnaFusionFusionPartner5prime getFusionPartner5prime()

setFusionPartner5prime

public void setFusionPartner5prime(RnaFusionFusionPartner5prime fusionPartner5prime)

effect

public RnaFusion effect(@Nullable java.lang.String effect)

getEffect

public @Nullable java.lang.String getEffect()

setEffect

public void setEffect(@Nullable java.lang.String effect)

externalIds

public RnaFusion externalIds(@Nullable java.util.List<VariantExternalId> externalIds)

addExternalIdsItem

public RnaFusion addExternalIdsItem(VariantExternalId externalIdsItem)

getExternalIds

public @Nullable java.util.List<VariantExternalId> getExternalIds()

setExternalIds

public void setExternalIds(@Nullable java.util.List<VariantExternalId> externalIds)

id

public RnaFusion id(java.lang.String id)

getId

public java.lang.String getId()

setId

public void setId(java.lang.String id)

reportedNumReads

public RnaFusion reportedNumReads(java.lang.Integer reportedNumReads)

getReportedNumReads

public java.lang.Integer getReportedNumReads()

setReportedNumReads

public void setReportedNumReads(java.lang.Integer reportedNumReads)

patient

public RnaFusion patient(Reference patient)

getPatient

public Reference getPatient()

setPatient

public void setPatient(Reference patient)

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

builder

public static RnaFusion.Builder builder()

toBuilder

public RnaFusion.Builder toBuilder()