Package dev.pcvolkmer.mv64e.model

Class Cnv.Builder

java.lang.Object

dev.pcvolkmer.mv64e.model.Cnv.Builder

Enclosing class:

Cnv

public static class Cnv.Builder
extends java.lang.Object

Constructor Summary

Constructors

Modifier	Constructor	Description
	Builder()
protected	Builder(Cnv instance)

Method Summary

Modifier and Type	Method	Description
Cnv	build()
Cnv.Builder	chromosome(Chromosome chromosome)
Cnv.Builder	cnA(@Nullable java.math.BigDecimal cnA)
Cnv.Builder	cnB(@Nullable java.math.BigDecimal cnB)
Cnv.Builder	copyNumberNeutralLoH(@Nullable java.util.Set<Coding> copyNumberNeutralLoH)
Cnv.Builder	endRange(@Nullable CnvEndRange endRange)
Cnv.Builder	externalIds(@Nullable java.util.List<VariantExternalId> externalIds)
Cnv.Builder	id(java.lang.String id)
Cnv.Builder	localization(@Nullable java.util.Set<BaseVariantLocalizationCoding> localization)
Cnv.Builder	patient(Reference patient)
Cnv.Builder	relativeCopyNumber(@Nullable java.math.BigDecimal relativeCopyNumber)
Cnv.Builder	reportedAffectedGenes(@Nullable java.util.Set<Coding> reportedAffectedGenes)
Cnv.Builder	reportedFocality(@Nullable java.lang.String reportedFocality)
Cnv.Builder	startRange(@Nullable CnvStartRange startRange)
java.lang.String	toString()
Cnv.Builder	totalCopyNumber(@Nullable java.lang.Integer totalCopyNumber)
Cnv.Builder	type(CnvTypeCoding type)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

Builder

public Builder()

Builder

protected Builder(Cnv instance)

Method Detail

localization

public Cnv.Builder localization(@Nullable java.util.Set<BaseVariantLocalizationCoding> localization)

reportedFocality

public Cnv.Builder reportedFocality(@Nullable java.lang.String reportedFocality)

reportedAffectedGenes

public Cnv.Builder reportedAffectedGenes(@Nullable java.util.Set<Coding> reportedAffectedGenes)

totalCopyNumber

public Cnv.Builder totalCopyNumber(@Nullable java.lang.Integer totalCopyNumber)

cnA

public Cnv.Builder cnA(@Nullable java.math.BigDecimal cnA)

externalIds

public Cnv.Builder externalIds(@Nullable java.util.List<VariantExternalId> externalIds)

startRange

public Cnv.Builder startRange(@Nullable CnvStartRange startRange)

type

public Cnv.Builder type(CnvTypeCoding type)

patient

public Cnv.Builder patient(Reference patient)

endRange

public Cnv.Builder endRange(@Nullable CnvEndRange endRange)

chromosome

public Cnv.Builder chromosome(Chromosome chromosome)

id

public Cnv.Builder id(java.lang.String id)

cnB

public Cnv.Builder cnB(@Nullable java.math.BigDecimal cnB)

relativeCopyNumber

public Cnv.Builder relativeCopyNumber(@Nullable java.math.BigDecimal relativeCopyNumber)

copyNumberNeutralLoH

public Cnv.Builder copyNumberNeutralLoH(@Nullable java.util.Set<Coding> copyNumberNeutralLoH)

build

public Cnv build()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object