Package dev.pcvolkmer.mv64e.datamapper.mapper

Class MolekulargenetikNgsDataMapper

java.lang.Object

dev.pcvolkmer.mv64e.datamapper.mapper.MolekulargenetikNgsDataMapper

All Implemented Interfaces:

DataMapper<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport>

public class MolekulargenetikNgsDataMapper
extends java.lang.Object
implements DataMapper<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport>

Mapper class to load and map prozedur data from database table 'dk_molekulargenetik'

Since:

0.1

Constructor Summary

Constructors

Constructor	Description
MolekulargenetikNgsDataMapper(MolekulargenetikCatalogue catalogue, MolekulargenuntersuchungCatalogue untersuchungCatalogue, PropertyCatalogue propertyCatalogue, dev.pcvolkmer.mv64e.mtb.TumorCellContentMethodCodingCode tumorCellContentMethod)

Method Summary

Modifier and Type	Method	Description
java.util.List<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport>	getAllByKpaId(int kpaId)	Loads and maps all Prozedur related by KPA database id
java.util.List<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport>	getAllByKpaIdWithHisto(int kpaId, java.util.List<java.lang.Integer> molgenIdsFromHisto)	Loads and maps all Prozedur related by KPA database id
@Nullable dev.pcvolkmer.mv64e.mtb.SomaticNgsReport	getById(int id)	Loads and maps Prozedur related by database id

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MolekulargenetikNgsDataMapper

public MolekulargenetikNgsDataMapper(MolekulargenetikCatalogue catalogue,
                                     MolekulargenuntersuchungCatalogue untersuchungCatalogue,
                                     PropertyCatalogue propertyCatalogue,
                                     dev.pcvolkmer.mv64e.mtb.TumorCellContentMethodCodingCode tumorCellContentMethod)

Method Detail

getById

public @Nullable dev.pcvolkmer.mv64e.mtb.SomaticNgsReport getById(int id)

Loads and maps Prozedur related by database id

Specified by:

getById in interface DataMapper<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport>

Parameters:

id - The database id of the procedure data set

Returns:

The loaded Procedure

getAllByKpaId

public java.util.List<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport> getAllByKpaId(int kpaId)

Loads and maps all Prozedur related by KPA database id

Parameters:

kpaId - The database id of the KPA procedure data set

Returns:

The loaded Procedures

getAllByKpaIdWithHisto

public java.util.List<dev.pcvolkmer.mv64e.mtb.SomaticNgsReport> getAllByKpaIdWithHisto(int kpaId,
                                                                                       java.util.List<java.lang.Integer> molgenIdsFromHisto)

Loads and maps all Prozedur related by KPA database id

Parameters:

kpaId - The database id of the KPA procedure data set

molgenIdsFromHisto - List of procedure IDs for related histology forms

Returns:

The loaded Procedures