diff options
| author | Paul-Christian Volkmer | 2023-07-27 23:16:19 +0200 |
|---|---|---|
| committer | Paul-Christian Volkmer | 2023-07-27 23:16:19 +0200 |
| commit | aa5b35970af967e972edd6ed435d75184b36d4d5 (patch) | |
| tree | 48df18bc2ac80379884307f6b9fc595534519511 /src/main/kotlin/dev/dnpm/etl | |
| parent | 90c5b81c2b6412a7bf01fa872ca84b5bb13ccb6a (diff) | |
Code polish for PR
* Do not use component creation using annotation on classes since components will
be created within AppConfiguration config class
* Patient PseudonymizeService intentionally uses prefix. If no prefix is configured,
the default value "UNKNOWN" will be used to prevent conflicts with other
organizations and to show the source organization.
Diffstat (limited to 'src/main/kotlin/dev/dnpm/etl')
3 files changed, 7 insertions, 9 deletions
diff --git a/src/main/kotlin/dev/dnpm/etl/processor/config/AppConfiguration.kt b/src/main/kotlin/dev/dnpm/etl/processor/config/AppConfiguration.kt index 50d848a..c677f2b 100644 --- a/src/main/kotlin/dev/dnpm/etl/processor/config/AppConfiguration.kt +++ b/src/main/kotlin/dev/dnpm/etl/processor/config/AppConfiguration.kt @@ -24,14 +24,16 @@ import dev.dnpm.etl.processor.monitoring.ReportService import dev.dnpm.etl.processor.output.KafkaMtbFileSender import dev.dnpm.etl.processor.output.MtbFileSender import dev.dnpm.etl.processor.output.RestMtbFileSender -import dev.dnpm.etl.processor.pseudonym.* +import dev.dnpm.etl.processor.pseudonym.AnonymizingGenerator +import dev.dnpm.etl.processor.pseudonym.Generator +import dev.dnpm.etl.processor.pseudonym.GpasPseudonymGenerator +import dev.dnpm.etl.processor.pseudonym.PseudonymizeService import org.springframework.boot.autoconfigure.condition.ConditionalOnProperty import org.springframework.boot.context.properties.EnableConfigurationProperties import org.springframework.context.annotation.Bean import org.springframework.context.annotation.Configuration import org.springframework.kafka.core.KafkaTemplate import reactor.core.publisher.Sinks -import java.net.URI @Configuration @EnableConfigurationProperties( diff --git a/src/main/kotlin/dev/dnpm/etl/processor/output/KafkaMtbFileSender.kt b/src/main/kotlin/dev/dnpm/etl/processor/output/KafkaMtbFileSender.kt index 4bb0206..9867deb 100644 --- a/src/main/kotlin/dev/dnpm/etl/processor/output/KafkaMtbFileSender.kt +++ b/src/main/kotlin/dev/dnpm/etl/processor/output/KafkaMtbFileSender.kt @@ -23,9 +23,7 @@ import com.fasterxml.jackson.databind.ObjectMapper import de.ukw.ccc.bwhc.dto.MtbFile import org.slf4j.LoggerFactory import org.springframework.kafka.core.KafkaTemplate -import org.springframework.stereotype.Component -@Component class KafkaMtbFileSender( private val kafkaTemplate: KafkaTemplate<String, String>, private val objectMapper: ObjectMapper @@ -37,7 +35,8 @@ class KafkaMtbFileSender( return try { val result = kafkaTemplate.sendDefault( String.format( - "{\"pid\": \"%s\", \"eid\": \"%s\"}", mtbFile.patient.id, + "{\"pid\": \"%s\", \"eid\": \"%s\"}", + mtbFile.patient.id, mtbFile.episode.id ), objectMapper.writeValueAsString(mtbFile) ) diff --git a/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/PseudonymizeService.kt b/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/PseudonymizeService.kt index 21e0f9a..364e296 100644 --- a/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/PseudonymizeService.kt +++ b/src/main/kotlin/dev/dnpm/etl/processor/pseudonym/PseudonymizeService.kt @@ -19,7 +19,6 @@ package dev.dnpm.etl.processor.pseudonym -import ca.uhn.fhir.util.StringUtil import de.ukw.ccc.bwhc.dto.MtbFile import dev.dnpm.etl.processor.config.PseudonymizeConfigProperties @@ -29,9 +28,7 @@ class PseudonymizeService( ) { fun pseudonymize(mtbFile: MtbFile): MtbFile { - val patientPseudonym: String = if(configProperties.prefix.isNotEmpty()) - "${configProperties.prefix}_${generator.generate(mtbFile.patient.id)}" - else generator.generate(mtbFile.patient.id) + val patientPseudonym = "${configProperties.prefix}_${generator.generate(mtbFile.patient.id)}" mtbFile.episode.patient = patientPseudonym mtbFile.carePlans.forEach { it.patient = patientPseudonym } |
