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authorPaul-Christian Volkmer2025-12-16 01:02:13 +0100
committerPaul-Christian Volkmer2025-12-16 01:03:47 +0100
commit6cfb84770832a3e6cfb209c783a9fda52c5c9141 (patch)
treee3d375b34360a990ad4f516cf56914960c01de9f /src/test/kotlin
parenta7384733dddd5fb822c53c1d31517d4a342f5dc6 (diff)
deps!: update dto lib to version 0.2.0 (#226)
This release is for use with DNPM:DIP (api-gateway) Version >= 1.2.3 and uses patients birthDay and date of death in format 'yyyy-MM' (without day) with fallback to accept old format 'yyyy-MM-dd'.
Diffstat (limited to 'src/test/kotlin')
-rw-r--r--src/test/kotlin/dev/dnpm/etl/processor/services/TransformationServiceTest.kt11
1 files changed, 7 insertions, 4 deletions
diff --git a/src/test/kotlin/dev/dnpm/etl/processor/services/TransformationServiceTest.kt b/src/test/kotlin/dev/dnpm/etl/processor/services/TransformationServiceTest.kt
index c6438e8..a4af214 100644
--- a/src/test/kotlin/dev/dnpm/etl/processor/services/TransformationServiceTest.kt
+++ b/src/test/kotlin/dev/dnpm/etl/processor/services/TransformationServiceTest.kt
@@ -19,14 +19,16 @@
package dev.dnpm.etl.processor.services
+import ca.uhn.fhir.context.FhirContext
+import com.fasterxml.jackson.databind.ObjectMapper
+import com.fasterxml.jackson.databind.node.ObjectNode
import dev.dnpm.etl.processor.config.JacksonConfig
import dev.pcvolkmer.mv64e.mtb.*
-import java.time.Instant
-import java.util.Date
import org.assertj.core.api.Assertions.assertThat
-import org.hl7.fhir.instance.model.api.IBaseResource
import org.junit.jupiter.api.BeforeEach
import org.junit.jupiter.api.Test
+import java.time.Instant
+import java.util.*
class TransformationServiceTest {
@@ -147,9 +149,10 @@ class TransformationServiceTest {
)
.build()
val consent = ConsentProcessorTest.getDummyGenomDeConsent()
+ val jsonNode = ObjectMapper().readValue(FhirContext.forR4().newJsonParser().encodeToString(consent), ObjectNode::class.java)
mvhMetadata.researchConsents = mutableListOf()
- mvhMetadata.researchConsents.add(mapOf(consent.id to consent as IBaseResource))
+ mvhMetadata.researchConsents.add(MvhMetadata.ResearchConsent.from(jsonNode))
val mtbFile = Mtb.builder().metadata(mvhMetadata).build()