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authorPaul-Christian Volkmer2023-03-20 16:43:07 +0100
committerPaul-Christian Volkmer2023-03-20 22:29:32 +0100
commit887221d5aec7fbe32a86b705b33aa4b5d2fa7062 (patch)
tree665c53fd39595acca562cd7758e5cf919fc1fab5
parentef5c91a352788a2ad84afa18fa0c7cdadec70ed8 (diff)
Issue #11: Service zum Generieren des Protokollauszugs aus MTBs
Implementierungen vorhanden für die Formulare: * OS.Tumorkonferenz * OS.Tumorkonferenz.VarianteUKW
-rw-r--r--src/main/java/DNPM/services/mtb/DefaultMtbService.java39
-rw-r--r--src/main/java/DNPM/services/mtb/MtbService.java9
-rw-r--r--src/main/java/DNPM/services/mtb/OsTumorkonferenzToProtocolMapper.java33
-rw-r--r--src/main/java/DNPM/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapper.java42
-rw-r--r--src/main/java/DNPM/services/mtb/ProcedureToProtocolMapper.java10
-rw-r--r--src/test/java/DNPM/services/mtb/DefaultMtbServiceTest.java110
6 files changed, 243 insertions, 0 deletions
diff --git a/src/main/java/DNPM/services/mtb/DefaultMtbService.java b/src/main/java/DNPM/services/mtb/DefaultMtbService.java
new file mode 100644
index 0000000..40d9360
--- /dev/null
+++ b/src/main/java/DNPM/services/mtb/DefaultMtbService.java
@@ -0,0 +1,39 @@
+package DNPM.services.mtb;
+
+import DNPM.services.SettingsService;
+import de.itc.onkostar.api.Procedure;
+
+import java.util.List;
+
+public class DefaultMtbService implements MtbService {
+
+ private final SettingsService settingsService;
+
+ public DefaultMtbService(final SettingsService settingsService) {
+ this.settingsService = settingsService;
+ }
+
+ @Override
+ public String getProtocol(List<Procedure> procedures) {
+ ProcedureToProtocolMapper mapper = null;
+ var sid = settingsService.getSID();
+
+ if (sid.isPresent()) {
+ switch (sid.get()) {
+ case "20119":
+ mapper = new OsTumorkonferenzVarianteUkwToProtocolMapper();
+ default:
+ if (!settingsService.multipleMtbsInMtbEpisode()) {
+ mapper = new OsTumorkonferenzToProtocolMapper();
+ }
+ }
+ }
+
+ if (null == mapper) {
+ return "";
+ }
+
+ return mapper.apply(procedures).orElse("");
+ }
+
+}
diff --git a/src/main/java/DNPM/services/mtb/MtbService.java b/src/main/java/DNPM/services/mtb/MtbService.java
new file mode 100644
index 0000000..b854307
--- /dev/null
+++ b/src/main/java/DNPM/services/mtb/MtbService.java
@@ -0,0 +1,9 @@
+package DNPM.services.mtb;
+
+import de.itc.onkostar.api.Procedure;
+
+import java.util.List;
+
+public interface MtbService {
+ String getProtocol(List<Procedure> procedures);
+}
diff --git a/src/main/java/DNPM/services/mtb/OsTumorkonferenzToProtocolMapper.java b/src/main/java/DNPM/services/mtb/OsTumorkonferenzToProtocolMapper.java
new file mode 100644
index 0000000..f6684a2
--- /dev/null
+++ b/src/main/java/DNPM/services/mtb/OsTumorkonferenzToProtocolMapper.java
@@ -0,0 +1,33 @@
+package DNPM.services.mtb;
+
+import de.itc.onkostar.api.Procedure;
+
+import java.util.List;
+import java.util.Optional;
+
+public class OsTumorkonferenzToProtocolMapper implements ProcedureToProtocolMapper {
+ @Override
+ public Optional<String> apply(List<Procedure> procedures) {
+ assert(procedures.size() == 1);
+
+ var procedure = procedures.get(0);
+
+ assert(procedure.getFormName().equals("OS.Tumorkonferenz"));
+
+ var fragestellung = procedure.getValue("Fragestellung");
+ var empfehlung = procedure.getValue("Empfehlung");
+
+ if (
+ null != fragestellung && !fragestellung.getString().isBlank()
+ && null != empfehlung && !empfehlung.getString().isBlank()
+ ) {
+ return Optional.of(String.format("%s\n%s", fragestellung.getString(), empfehlung.getString()));
+ } else if (null != fragestellung && !fragestellung.getString().isBlank()) {
+ return Optional.of(fragestellung.getString());
+ } else if (null != empfehlung && !empfehlung.getString().isBlank()) {
+ return Optional.of(empfehlung.getString());
+ }
+
+ return Optional.empty();
+ }
+}
diff --git a/src/main/java/DNPM/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapper.java b/src/main/java/DNPM/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapper.java
new file mode 100644
index 0000000..de36415
--- /dev/null
+++ b/src/main/java/DNPM/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapper.java
@@ -0,0 +1,42 @@
+package DNPM.services.mtb;
+
+import de.itc.onkostar.api.Procedure;
+
+import java.util.Comparator;
+import java.util.List;
+import java.util.Optional;
+import java.util.stream.Collectors;
+
+public class OsTumorkonferenzVarianteUkwToProtocolMapper implements ProcedureToProtocolMapper {
+ @Override
+ public Optional<String> apply(List<Procedure> procedures) {
+ procedures.forEach(procedure -> {
+ assert (procedure.getFormName().equals("OS.Tumorkonferenz.VarianteUKW"));
+ });
+
+ procedures.sort(Comparator.comparing(Procedure::getStartDate));
+
+ var result = procedures.stream().map(procedure -> {
+ var fragestellung = procedure.getValue("Fragestellung");
+ var empfehlung = procedure.getValue("Empfehlung");
+
+ if (
+ null != fragestellung && !fragestellung.getString().isBlank()
+ && null != empfehlung && !empfehlung.getString().isBlank()
+ ) {
+ return String.format("%s\n%s", fragestellung.getString(), empfehlung.getString());
+ } else if (null != fragestellung && !fragestellung.getString().isBlank()) {
+ return fragestellung.getString();
+ } else if (null != empfehlung && !empfehlung.getString().isBlank()) {
+ return empfehlung.getString();
+ }
+ return "";
+ }).collect(Collectors.joining("\n"));
+
+ if (!result.isBlank()) {
+ return Optional.of(result);
+ }
+
+ return Optional.empty();
+ }
+}
diff --git a/src/main/java/DNPM/services/mtb/ProcedureToProtocolMapper.java b/src/main/java/DNPM/services/mtb/ProcedureToProtocolMapper.java
new file mode 100644
index 0000000..54c04d9
--- /dev/null
+++ b/src/main/java/DNPM/services/mtb/ProcedureToProtocolMapper.java
@@ -0,0 +1,10 @@
+package DNPM.services.mtb;
+
+import de.itc.onkostar.api.Procedure;
+
+import java.util.List;
+import java.util.Optional;
+import java.util.function.Function;
+
+@FunctionalInterface
+public interface ProcedureToProtocolMapper extends Function<List<Procedure>, Optional<String>> {}
diff --git a/src/test/java/DNPM/services/mtb/DefaultMtbServiceTest.java b/src/test/java/DNPM/services/mtb/DefaultMtbServiceTest.java
new file mode 100644
index 0000000..6230edd
--- /dev/null
+++ b/src/test/java/DNPM/services/mtb/DefaultMtbServiceTest.java
@@ -0,0 +1,110 @@
+package DNPM.services.mtb;
+
+import DNPM.services.SettingsService;
+import de.itc.onkostar.api.IOnkostarApi;
+import de.itc.onkostar.api.Item;
+import de.itc.onkostar.api.Procedure;
+import org.junit.jupiter.api.BeforeEach;
+import org.junit.jupiter.api.Test;
+import org.junit.jupiter.api.extension.ExtendWith;
+import org.mockito.Mock;
+import org.mockito.junit.jupiter.MockitoExtension;
+
+import java.time.Instant;
+import java.util.Arrays;
+import java.util.Date;
+import java.util.List;
+import java.util.Optional;
+
+import static org.assertj.core.api.Assertions.assertThat;
+import static org.mockito.Mockito.when;
+
+@ExtendWith(MockitoExtension.class)
+public class DefaultMtbServiceTest {
+
+ @Mock
+ private IOnkostarApi onkostarApi;
+
+ @Mock
+ private SettingsService settingsService;
+
+ private DefaultMtbService service;
+
+ @BeforeEach
+ void setup() {
+ this.service = new DefaultMtbService(settingsService);
+ }
+
+ @Test
+ void testShouldReturnMtbProtocolForDefaultImplementation() {
+
+ when(settingsService.getSID()).thenReturn(Optional.of("12345"));
+ when(settingsService.multipleMtbsInMtbEpisode()).thenReturn(false);
+
+ var procedure1 = new Procedure(onkostarApi);
+ procedure1.setFormName("OS.Tumorkonferenz");
+ procedure1.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z")));
+ procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test ok?"));
+ procedure1.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!"));
+
+ var procedures = List.of(
+ procedure1
+ );
+
+ var actual = service.getProtocol(procedures);
+
+ assertThat(actual).isEqualTo("Test ok?\nRerun Test if not ok!");
+ }
+
+ @Test
+ void testShouldReturnEmptyMtbProtocolForMultipleMtb() {
+
+ when(settingsService.getSID()).thenReturn(Optional.of("12345"));
+ when(settingsService.multipleMtbsInMtbEpisode()).thenReturn(true);
+
+ var procedure1 = new Procedure(onkostarApi);
+ procedure1.setFormName("OS.Tumorkonferenz");
+ procedure1.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z")));
+ procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test ok?"));
+ procedure1.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!"));
+
+ var procedures = List.of(
+ procedure1
+ );
+
+ var actual = service.getProtocol(procedures);
+
+ assertThat(actual).isEmpty();
+ }
+
+ @Test
+ void testShouldReturnMtbProtocolForSID20119() {
+ when(settingsService.getSID()).thenReturn(Optional.of("20119"));
+ when(settingsService.multipleMtbsInMtbEpisode()).thenReturn(true);
+
+ var procedure1 = new Procedure(onkostarApi);
+ procedure1.setFormName("OS.Tumorkonferenz.VarianteUKW");
+ procedure1.setStartDate(Date.from(Instant.parse("2023-02-01T00:00:00Z")));
+ procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test immer noch ok?"));
+ procedure1.setValue("Empfehlung", new Item("Empfehlung", "Do not rerun Test if ok!"));
+
+ var procedure2 = new Procedure(onkostarApi);
+ procedure2.setFormName("OS.Tumorkonferenz.VarianteUKW");
+ procedure2.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z")));
+ procedure2.setValue("Fragestellung", new Item("Fragestellung", "Test ok?"));
+ procedure2.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!"));
+
+
+ var procedures = Arrays.asList(
+ procedure1,
+ procedure2
+ );
+
+ var actual = service.getProtocol(procedures);
+
+ assertThat(actual).isEqualTo(
+ "Test ok?\nRerun Test if not ok!\nTest immer noch ok?\nDo not rerun Test if ok!"
+ );
+ }
+
+}