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authorPaul-Christian Volkmer2025-10-23 11:08:10 +0200
committerPaul-Christian Volkmer2025-10-23 11:09:54 +0200
commit84fb0d829832bf1628112376bba729422b169402 (patch)
tree4828674b77105877dccfcccb380da3f7c0f75987 /src/main/java/dev/dnpm/services/systemtherapie
parent61e7dfcbe637f401f81ff853e9bd10c90b325acb (diff)
refactor: change package name
Diffstat (limited to 'src/main/java/dev/dnpm/services/systemtherapie')
-rw-r--r--src/main/java/dev/dnpm/services/systemtherapie/DefaultSystemtherapieService.java122
-rw-r--r--src/main/java/dev/dnpm/services/systemtherapie/OsSystemischeTherapieToProzedurwerteMapper.java114
-rw-r--r--src/main/java/dev/dnpm/services/systemtherapie/ProzedurToProzedurwerteMapper.java38
-rw-r--r--src/main/java/dev/dnpm/services/systemtherapie/SystemtherapieService.java53
4 files changed, 0 insertions, 327 deletions
diff --git a/src/main/java/dev/dnpm/services/systemtherapie/DefaultSystemtherapieService.java b/src/main/java/dev/dnpm/services/systemtherapie/DefaultSystemtherapieService.java
deleted file mode 100644
index fdac25c..0000000
--- a/src/main/java/dev/dnpm/services/systemtherapie/DefaultSystemtherapieService.java
+++ /dev/null
@@ -1,122 +0,0 @@
-/*
- * This file is part of onkostar-plugin-dnpm
- *
- * Copyright (c) 2025 the original author or authors.
- *
- * Permission is hereby granted, free of charge, to any person obtaining a copy
- * of this software and associated documentation files (the "Software"), to deal
- * in the Software without restriction, including without limitation the rights
- * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
- * copies of the Software, and to permit persons to whom the Software is
- * furnished to do so, subject to the following conditions:
- *
- * The above copyright notice and this permission notice shall be included in all
- * copies or substantial portions of the Software.
- *
- * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
- * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
- * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
- * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
- * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
- * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
- * SOFTWARE.
- */
-
-package dev.dnpm.services.systemtherapie;
-
-import dev.dnpm.dto.EcogStatusWithDate;
-import dev.dnpm.services.SettingsService;
-import de.itc.onkostar.api.IOnkostarApi;
-import de.itc.onkostar.api.Patient;
-import de.itc.onkostar.api.Procedure;
-
-import java.util.*;
-import java.util.stream.Collectors;
-
-/**
- * Standardimplementierung des Systemtherapieservices
- *
- * @since 0.2.0
- */
-public class DefaultSystemtherapieService implements SystemtherapieService {
-
- private static final String ECOG_FIELD = "ECOGvorTherapie";
-
- private final IOnkostarApi onkostarApi;
-
- private final SettingsService settingsService;
-
- public DefaultSystemtherapieService(final IOnkostarApi onkostarApi, final SettingsService settingsService) {
- this.onkostarApi = onkostarApi;
- this.settingsService = settingsService;
- }
-
- /**
- * Ermittelt eine Zusammenfassung der systemischen Therapien für eine Erkrankung
- *
- * @param diseaseId Die ID der Erkrankung
- * @return Zusammenfassung der systemischen Therapien
- */
- @Override
- public List<Map<String, String>> getSystemischeTherapienFromDiagnose(int diseaseId) {
- List<Map<String, String>> result = new ArrayList<>();
- for (Procedure prozedur : onkostarApi.getProceduresForDiseaseByForm(diseaseId, getFormName())) {
- prozedurToProzedurwerteMapper(prozedur).apply(prozedur).ifPresent(result::add);
- }
- return result;
- }
-
- /**
- * Übergibt aktuell immer den Mapper für das Formular "OS.Systemische Therapie",
- * da beide bekannte Varianten damit gemappt werden können.
- *
- * @param procedure Die Prozedur für die ein Mapper erstellt werden soll
- * @return Der Mapper für die Prozedur
- */
- @Override
- public ProzedurToProzedurwerteMapper prozedurToProzedurwerteMapper(Procedure procedure) {
- return new OsSystemischeTherapieToProzedurwerteMapper();
- }
-
- /**
- * Ermittelt den letzten bekannten ECOG-Status aus allen Systemtherapieformularen des Patienten
- *
- * @param patient Der zu verwendende Patient
- * @return Der ECOG-Status als String oder leeres Optional
- */
- @Override
- public Optional<String> latestEcogStatus(Patient patient) {
- return ecogStatus(patient).stream()
- .max(Comparator.comparing(EcogStatusWithDate::getDate))
- .map(EcogStatusWithDate::getStatus);
- }
-
- /**
- * Ermittelt jeden bekannten ECOG-Status aus allen Systemtherapieformularen des Patienten
- *
- * @param patient Der zu verwendende Patient
- * @return Eine Liste mit Datum und ECOG-Status als String
- */
- @Override
- public List<EcogStatusWithDate> ecogStatus(Patient patient) {
- return patient.getDiseases().stream()
- .flatMap(disease -> onkostarApi.getProceduresForDiseaseByForm(disease.getId(), getFormName()).stream())
- .filter(procedure -> null != procedure.getStartDate())
- .sorted(Comparator.comparing(Procedure::getStartDate))
- .map(procedure -> {
- try {
- return new EcogStatusWithDate(procedure.getStartDate(), procedure.getValue(ECOG_FIELD).getString());
- } catch (IllegalArgumentException e) {
- return null;
- }
- })
- .filter(Objects::nonNull)
- .collect(Collectors.toList());
- }
-
- private String getFormName() {
- return settingsService
- .getSetting("systemtherapieform")
- .orElse("OS.Systemische Therapie");
- }
-}
diff --git a/src/main/java/dev/dnpm/services/systemtherapie/OsSystemischeTherapieToProzedurwerteMapper.java b/src/main/java/dev/dnpm/services/systemtherapie/OsSystemischeTherapieToProzedurwerteMapper.java
deleted file mode 100644
index 8db1e93..0000000
--- a/src/main/java/dev/dnpm/services/systemtherapie/OsSystemischeTherapieToProzedurwerteMapper.java
+++ /dev/null
@@ -1,114 +0,0 @@
-/*
- * This file is part of onkostar-plugin-dnpm
- *
- * Copyright (c) 2025 the original author or authors.
- *
- * Permission is hereby granted, free of charge, to any person obtaining a copy
- * of this software and associated documentation files (the "Software"), to deal
- * in the Software without restriction, including without limitation the rights
- * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
- * copies of the Software, and to permit persons to whom the Software is
- * furnished to do so, subject to the following conditions:
- *
- * The above copyright notice and this permission notice shall be included in all
- * copies or substantial portions of the Software.
- *
- * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
- * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
- * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
- * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
- * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
- * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
- * SOFTWARE.
- */
-
-package dev.dnpm.services.systemtherapie;
-
-import com.fasterxml.jackson.core.JsonProcessingException;
-import com.fasterxml.jackson.databind.ObjectMapper;
-import de.itc.onkostar.api.Item;
-import de.itc.onkostar.api.Procedure;
-import de.ukw.ccc.onkostar.atccodes.AtcCode;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import java.util.*;
-
-/**
- * Implementierung zum Mappen des Formulars "OS.Systemische Therapie" auf die Prozedurwerte
- *
- * @since 0.2.0
- */
-public class OsSystemischeTherapieToProzedurwerteMapper implements ProzedurToProzedurwerteMapper {
-
- private static final Logger logger = LoggerFactory.getLogger(OsSystemischeTherapieToProzedurwerteMapper.class);
-
- @Override
- public Optional<Map<String, String>> apply(Procedure procedure) {
- try {
- return Optional.of(getProzedurwerte(procedure));
- } catch (Exception e) {
- logger.error("Fehler beim Mappen der Prozedur auf Prozedurwerte", e);
- return Optional.empty();
- }
- }
-
- private static Map<String, String> getProzedurwerte(Procedure prozedur) {
- List<String> wirkstoffListe = new ArrayList<>();
- // SubstanzenCodesListe enthält die Liste der SubstanzenCodes
- List<Map<String, String>> substanzenCodesListe = new ArrayList<>();
-
- // alle Werte der Prozedur auslesen
- Map<String, Item> alleWerte = prozedur.getAllValues();
- // Prozedurwerte enthält nur die interessanten Werte
- Map<String, String> prozedurwerte = new HashMap<>();
- // alle Werte durchgehen und die interessanten übernehmen
- if (alleWerte.containsKey("Beendigung")) {
- prozedurwerte.put("Beendigung", alleWerte.get("Beendigung").getValue());
- }
- if (alleWerte.containsKey("Ergebnis")) {
- prozedurwerte.put("Ergebnis", alleWerte.get("Ergebnis").getValue());
- }
- if (alleWerte.containsKey("Beginn")) {
- prozedurwerte.put("Beginn", alleWerte.get("Beginn").getString());
- }
- if (alleWerte.containsKey("Ende")) {
- prozedurwerte.put("Ende", alleWerte.get("Ende").getString());
- }
- if (alleWerte.containsKey("SubstanzenList")) {
- List<Map<String, String>> substanzList = alleWerte.get("SubstanzenList").getValue();
- for (var substanz : substanzList) {
- var substanzCodes = getSubstanzCode(substanz);
- substanzenCodesListe.add(substanzCodes);
- wirkstoffListe.add(substanzCodes.get("substance"));
- }
- }
-
- prozedurwerte.put("Wirkstoffe", String.join(", ", wirkstoffListe));
- try {
- ObjectMapper mapper = new ObjectMapper();
- prozedurwerte.put("WirkstoffCodes", mapper.writeValueAsString(substanzenCodesListe));
- } catch (JsonProcessingException e) {
- logger.error("Kann 'WirkstoffCodes' nicht in JSON-String mappen", e);
- }
-
- return prozedurwerte;
- }
-
- private static Map<String, String> getSubstanzCode(Map<String, String> substanz) {
- Map<String, String> substanzCode = new HashMap<>();
- if (substanz.containsKey("Substanz")) {
- if (AtcCode.isAtcCode(substanz.get("Substanz"))) {
- substanzCode.put("system", "ATC");
- } else {
- substanzCode.put("system", "other");
- }
- substanzCode.put("code", substanz.get("Substanz"));
-
- }
- if (substanz.containsKey("Substanz_shortDescription")) {
- substanzCode.put("substance", substanz.get("Substanz_shortDescription"));
- }
- return substanzCode;
- }
-}
diff --git a/src/main/java/dev/dnpm/services/systemtherapie/ProzedurToProzedurwerteMapper.java b/src/main/java/dev/dnpm/services/systemtherapie/ProzedurToProzedurwerteMapper.java
deleted file mode 100644
index de5bdb8..0000000
--- a/src/main/java/dev/dnpm/services/systemtherapie/ProzedurToProzedurwerteMapper.java
+++ /dev/null
@@ -1,38 +0,0 @@
-/*
- * This file is part of onkostar-plugin-dnpm
- *
- * Copyright (c) 2025 the original author or authors.
- *
- * Permission is hereby granted, free of charge, to any person obtaining a copy
- * of this software and associated documentation files (the "Software"), to deal
- * in the Software without restriction, including without limitation the rights
- * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
- * copies of the Software, and to permit persons to whom the Software is
- * furnished to do so, subject to the following conditions:
- *
- * The above copyright notice and this permission notice shall be included in all
- * copies or substantial portions of the Software.
- *
- * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
- * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
- * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
- * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
- * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
- * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
- * SOFTWARE.
- */
-
-package dev.dnpm.services.systemtherapie;
-
-import de.itc.onkostar.api.Procedure;
-
-import java.util.Map;
-import java.util.Optional;
-import java.util.function.Function;
-
-/**
- * Mapper um ein Systemtherapieformular in eine Optional-Map mit Prozedurwerten umzuwandeln
- *
- * @since 0.2.0
- */
-public interface ProzedurToProzedurwerteMapper extends Function<Procedure, Optional<Map<String, String>>> {}
diff --git a/src/main/java/dev/dnpm/services/systemtherapie/SystemtherapieService.java b/src/main/java/dev/dnpm/services/systemtherapie/SystemtherapieService.java
deleted file mode 100644
index 0a1f1b8..0000000
--- a/src/main/java/dev/dnpm/services/systemtherapie/SystemtherapieService.java
+++ /dev/null
@@ -1,53 +0,0 @@
-/*
- * This file is part of onkostar-plugin-dnpm
- *
- * Copyright (c) 2025 the original author or authors.
- *
- * Permission is hereby granted, free of charge, to any person obtaining a copy
- * of this software and associated documentation files (the "Software"), to deal
- * in the Software without restriction, including without limitation the rights
- * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
- * copies of the Software, and to permit persons to whom the Software is
- * furnished to do so, subject to the following conditions:
- *
- * The above copyright notice and this permission notice shall be included in all
- * copies or substantial portions of the Software.
- *
- * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
- * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
- * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
- * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
- * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
- * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
- * SOFTWARE.
- */
-
-package dev.dnpm.services.systemtherapie;
-
-import dev.dnpm.services.TherapieMitEcogService;
-import de.itc.onkostar.api.Procedure;
-
-import java.util.List;
-import java.util.Map;
-
-/**
- * Service für Systemtherapieformulare
- *
- * @since 0.2.0
- */
-public interface SystemtherapieService extends TherapieMitEcogService {
- /**
- * Ermittelt eine Zusammenfassung der systemischen Therapien für eine Erkrankung
- * @param diseaseId Die ID der Erkrankung
- * @return Die Zusammenfassung der systemischen Therapien
- */
- List<Map<String, String>> getSystemischeTherapienFromDiagnose(int diseaseId);
-
- /**
- * Erstellt den Mapper for die Prozedur
- * @param procedure Die Prozedur für die ein Mapper erstellt werden soll
- * @return Der erstellte ProzedurToProzedurwerteMapper
- */
- ProzedurToProzedurwerteMapper prozedurToProzedurwerteMapper(Procedure procedure);
-
-}