diff options
Diffstat (limited to 'src/test/java/dev/dnpm/oshelper/services')
15 files changed, 1355 insertions, 0 deletions
diff --git a/src/test/java/dev/dnpm/oshelper/services/SettingsServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/SettingsServiceTest.java new file mode 100644 index 0000000..b8fb3ed --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/SettingsServiceTest.java @@ -0,0 +1,62 @@ +package dev.dnpm.oshelper.services; + +import de.itc.db.dnpm.Setting; +import dev.dnpm.oshelper.database.SettingsRepository; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.anyString; +import static org.mockito.Mockito.doAnswer; + +@ExtendWith(MockitoExtension.class) +class SettingsServiceTest { + + private SettingsRepository settingsRepository; + + private SettingsService service; + + @BeforeEach + void setUp( + @Mock SettingsRepository settingsRepository + ) { + this.settingsRepository = settingsRepository; + this.service = new SettingsService(settingsRepository); + } + + @Test + void shouldReturnSID() { + doAnswer(invocationOnMock -> { + var name = invocationOnMock.getArgument(0, String.class); + if (null != name && name.equals("SID")) { + return new Setting(1L, "SID", "12345"); + } + return null; + }).when(settingsRepository).findByName(anyString()); + + var actual = service.getSID(); + assertThat(actual) + .isPresent() + .contains("12345"); + } + + @Test + void shouldReturnSIDByName() { + doAnswer(invocationOnMock -> { + var name = invocationOnMock.getArgument(0, String.class); + if (null != name && name.equals("SID")) { + return new Setting(1L, "SID", "12345"); + } + return null; + }).when(settingsRepository).findByName(anyString()); + + var actual = service.getSetting("SID"); + assertThat(actual) + .isPresent() + .contains("12345"); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/StudieTest.java b/src/test/java/dev/dnpm/oshelper/services/StudieTest.java new file mode 100644 index 0000000..e60483e --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/StudieTest.java @@ -0,0 +1,55 @@ +package dev.dnpm.oshelper.services; + +import dev.dnpm.oshelper.dto.Studie; +import org.junit.jupiter.api.Test; + +import static org.assertj.core.api.Assertions.assertThat; + +class StudieTest { + + @Test + void shouldDetectStudieWithNctNumber() { + var studie = new Studie( + "Kat 1", + 1, + null, + "Nct-12345678", + "Teststudie 1", + "Teststudie 1", + true + ); + + assertThat(studie.getType()).isEqualTo(Studie.Type.NCT); + } + + @Test + void shouldDetectStudieWithEudraCtNumber() { + var studie = new Studie( + "Kat 1", + 1, + null, + "2023-012345-12", + "Teststudie 1", + "Teststudie 1", + true + ); + + assertThat(studie.getType()).isEqualTo(Studie.Type.EUDRA_CT); + } + + @Test + void shouldReturnStudieWithUnknownNumberScheme() { + var studie = new Studie( + "Kat 1", + 1, + "teststudie1", + null, + "Teststudie 1", + "Teststudie 1", + true + ); + + assertThat(studie.getType()).isEqualTo(Studie.Type.UNKNOWN); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/consent/ConsentManagerServiceFactoryTest.java b/src/test/java/dev/dnpm/oshelper/services/consent/ConsentManagerServiceFactoryTest.java new file mode 100644 index 0000000..50c6f9b --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/consent/ConsentManagerServiceFactoryTest.java @@ -0,0 +1,50 @@ +package dev.dnpm.oshelper.services.consent; + +import de.itc.onkostar.api.IOnkostarApi; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.extension.ExtendWith; +import org.junit.jupiter.params.ParameterizedTest; +import org.junit.jupiter.params.provider.MethodSource; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.util.Map; +import java.util.Set; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.ArgumentMatchers.anyString; +import static org.mockito.Mockito.when; + +@ExtendWith(MockitoExtension.class) +class ConsentManagerServiceFactoryTest { + + private IOnkostarApi onkostarApi; + + private ConsentManagerServiceFactory consentManagerServiceFactory; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.consentManagerServiceFactory = new ConsentManagerServiceFactory(onkostarApi); + } + + private static Set<Map.Entry<String, Class<? extends ConsentManagerService>>> expectedMappings() { + return Map.ofEntries( + Map.entry("MR.Consent", MrConsentManagerService.class), + Map.entry("Excel-Formular", UkwConsentManagerService.class) + ).entrySet(); + } + + @ParameterizedTest + @MethodSource("expectedMappings") + void testShouldMapFormNameToService(Map.Entry<String, Class<?>> expectedMapping) { + when(onkostarApi.getGlobalSetting(anyString())).thenReturn(expectedMapping.getKey()); + + var actual = consentManagerServiceFactory.currentUsableInstance(); + + assertThat(actual).isExactlyInstanceOf(expectedMapping.getValue()); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/consent/MrConsentManagerServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/consent/MrConsentManagerServiceTest.java new file mode 100644 index 0000000..4143dff --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/consent/MrConsentManagerServiceTest.java @@ -0,0 +1,59 @@ +package dev.dnpm.oshelper.services.consent; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Procedure; +import org.hibernate.SQLQuery; +import org.hibernate.Session; +import org.hibernate.SessionFactory; +import org.hibernate.type.Type; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.ArgumentCaptor; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.*; + +@ExtendWith(MockitoExtension.class) +class MrConsentManagerServiceTest { + + private IOnkostarApi onkostarApi; + + private MrConsentManagerService service; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.service = new MrConsentManagerService(onkostarApi); + } + + @Test + void testShouldCreateSqlQueriesWithRelatedEntityIds() { + var sessionFactory = mock(SessionFactory.class); + var session = mock(Session.class); + var query = mock(SQLQuery.class); + + when(onkostarApi.getSessionFactory()).thenReturn(sessionFactory); + when(sessionFactory.getCurrentSession()).thenReturn(session); + when(session.createSQLQuery(anyString())).thenReturn(query); + when(query.addScalar(anyString(), any(Type.class))).thenReturn(query); + when(query.uniqueResult()).thenReturn(""); + + var dummyProzedur = new Procedure(this.onkostarApi); + dummyProzedur.setId(111); + dummyProzedur.setPatientId(123); + + this.service.applyConsent(dummyProzedur); + + var argumentCaptor = ArgumentCaptor.forClass(String.class); + verify(session, times(2)).createSQLQuery(argumentCaptor.capture()); + assertThat(argumentCaptor.getAllValues()).hasSize(2); + assertThat(argumentCaptor.getAllValues().get(0)).contains("where entity_id = '111'"); + assertThat(argumentCaptor.getAllValues().get(1)).contains("WHERE patient_id = 123 AND geloescht = 0"); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/consent/UkwConsentManagerServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/consent/UkwConsentManagerServiceTest.java new file mode 100644 index 0000000..985524f --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/consent/UkwConsentManagerServiceTest.java @@ -0,0 +1,138 @@ +package dev.dnpm.oshelper.services.consent; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.ArgumentCaptor; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.sql.Date; +import java.time.Instant; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.*; + +@ExtendWith(MockitoExtension.class) +class UkwConsentManagerServiceTest { + + private IOnkostarApi onkostarApi; + + private UkwConsentManagerService service; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.service = new UkwConsentManagerService(onkostarApi); + } + + @Test + void testShouldSkipUpdateRelatedDnpmKlinikAnamneseFormIfNoConsentAvailable() throws Exception { + + var excelForm = new Procedure(this.onkostarApi); + excelForm.setId(111); + excelForm.setPatientId(123); + excelForm.setValue("refdnpmklinikanamnese", new Item("refdnpmklinikanamnese", 2)); + + var dnpmKlinikAnamneseForm = new Procedure(this.onkostarApi); + dnpmKlinikAnamneseForm.setId(2); + dnpmKlinikAnamneseForm.setPatientId(123); + + when(onkostarApi.getProcedure(anyInt())).thenReturn(dnpmKlinikAnamneseForm); + + this.service.applyConsent(excelForm); + + verify(onkostarApi, times(0)).saveProcedure(any(Procedure.class), anyBoolean()); + } + + @Test + void testShouldSkipUpdateRelatedDnpmKlinikAnamneseFormIfNoConsentDateAvailable() throws Exception { + + var consentSubForm = new Procedure(this.onkostarApi); + consentSubForm.setId(1); + consentSubForm.setPatientId(123); + consentSubForm.setValue("status", new Item("status", "accepted")); + + + var excelForm = new Procedure(this.onkostarApi); + excelForm.setId(111); + excelForm.setPatientId(123); + excelForm.setValue("refdnpmklinikanamnese", new Item("refdnpmklinikanamnese", 2)); + excelForm.addSubProcedure("ufdnpmconsent", consentSubForm); + + var dnpmKlinikAnamneseForm = new Procedure(this.onkostarApi); + dnpmKlinikAnamneseForm.setId(2); + dnpmKlinikAnamneseForm.setPatientId(123); + + when(onkostarApi.getProcedure(anyInt())).thenReturn(dnpmKlinikAnamneseForm); + + this.service.applyConsent(excelForm); + + verify(onkostarApi, times(0)).saveProcedure(any(Procedure.class), anyBoolean()); + } + + @Test + void testShouldSkipUpdateRelatedDnpmKlinikAnamneseFormIfNoConsentValueAvailable() throws Exception { + + var consentSubForm = new Procedure(this.onkostarApi); + consentSubForm.setId(1); + consentSubForm.setPatientId(123); + consentSubForm.setStartDate(Date.from(Instant.parse("2023-04-03T12:00:00Z"))); + consentSubForm.setValue("datum", new Item("datum", Date.from(Instant.parse("2023-04-03T12:00:00Z")))); + + var excelForm = new Procedure(this.onkostarApi); + excelForm.setId(111); + excelForm.setPatientId(123); + excelForm.setValue("refdnpmklinikanamnese", new Item("refdnpmklinikanamnese", 2)); + excelForm.addSubProcedure("ufdnpmconsent", consentSubForm); + + var dnpmKlinikAnamneseForm = new Procedure(this.onkostarApi); + dnpmKlinikAnamneseForm.setId(2); + dnpmKlinikAnamneseForm.setPatientId(123); + + when(onkostarApi.getProcedure(anyInt())).thenReturn(dnpmKlinikAnamneseForm); + + this.service.applyConsent(excelForm); + + verify(onkostarApi, times(0)).saveProcedure(any(Procedure.class), anyBoolean()); + } + + @Test + void testShouldUpdateRelatedDnpmKlinikAnamneseFormOnFormSave() throws Exception { + + var consentSubForm = new Procedure(this.onkostarApi); + consentSubForm.setId(1); + consentSubForm.setPatientId(123); + consentSubForm.setStartDate(Date.from(Instant.parse("2023-04-03T12:00:00Z"))); + consentSubForm.setValue("datum", new Item("datum", Date.from(Instant.parse("2023-04-03T12:00:00Z")))); + consentSubForm.setValue("status", new Item("status", "accepted")); + + var excelForm = new Procedure(this.onkostarApi); + excelForm.setId(111); + excelForm.setPatientId(123); + excelForm.setValue("refdnpmklinikanamnese", new Item("refdnpmklinikanamnese", 2)); + excelForm.addSubProcedure("ufdnpmconsent", consentSubForm); + + var dnpmKlinikAnamneseForm = new Procedure(this.onkostarApi); + dnpmKlinikAnamneseForm.setId(2); + dnpmKlinikAnamneseForm.setPatientId(123); + + when(onkostarApi.getProcedure(anyInt())).thenReturn(dnpmKlinikAnamneseForm); + + this.service.applyConsent(excelForm); + + var argumentCaptor = ArgumentCaptor.forClass(Procedure.class); + verify(onkostarApi, times(1)).saveProcedure(argumentCaptor.capture(), anyBoolean()); + + var savedForm = argumentCaptor.getValue(); + assertThat(savedForm).isExactlyInstanceOf(Procedure.class); + assertThat(savedForm.getValue("ConsentStatusEinwilligungDNPM").getString()).isEqualTo("accepted"); + assertThat(savedForm.getValue("ConsentDatumEinwilligungDNPM").getDate()).isEqualTo("2023-04-03T12:00:00Z"); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/molekulargenetik/OsMolekluargenetikFormServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/molekulargenetik/OsMolekluargenetikFormServiceTest.java new file mode 100644 index 0000000..f17d964 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/molekulargenetik/OsMolekluargenetikFormServiceTest.java @@ -0,0 +1,49 @@ +package dev.dnpm.oshelper.services.molekulargenetik; + +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; + +import static org.assertj.core.api.Assertions.assertThat; + +class OsMolekluargenetikFormServiceTest { + + private OsMolekulargenetikFormService service; + + @BeforeEach + void setup() { + this.service = new OsMolekulargenetikFormService(); + } + + @Test + void testShouldReturnVariants() { + + var procedure = new Procedure(null); + procedure.setId(123); + procedure.setFormName("OS.Molekulargenetik"); + + var subProcedure1 = new Procedure(null); + subProcedure1.setId(1123); + subProcedure1.setFormName("OS.Molekulargenetische Untersuchung"); + subProcedure1.setValue("Ergebnis", new Item("Ergebnis", "P")); + subProcedure1.setValue("Untersucht", new Item("Untersucht", "BRAF")); + subProcedure1.setValue("ExonInt", new Item("ExonInt", 123)); + subProcedure1.setValue("Pathogenitaetsklasse", new Item("Pathogenitaetsklasse", "2")); + procedure.addSubProcedure("MolekulargenetischeUntersuchung", subProcedure1); + + var subProcedure2 = new Procedure(null); + subProcedure2.setId(2123); + subProcedure2.setFormName("OS.Molekulargenetische Untersuchung"); + subProcedure2.setValue("Ergebnis", new Item("Ergebnis", "CNV")); + subProcedure2.setValue("Untersucht", new Item("Untersucht", "BRAF")); + subProcedure2.setValue("ExonInt", new Item("ExonInt", 123)); + subProcedure2.setValue("Pathogenitaetsklasse", new Item("Pathogenitaetsklasse", "2")); + procedure.addSubProcedure("MolekulargenetischeUntersuchung", subProcedure2); + + var actual = service.getVariants(procedure); + + assertThat(actual).hasSize(2); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/mtb/DefaultMtbServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/mtb/DefaultMtbServiceTest.java new file mode 100644 index 0000000..723e997 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/mtb/DefaultMtbServiceTest.java @@ -0,0 +1,185 @@ +package dev.dnpm.oshelper.services.mtb; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.junit.jupiter.params.ParameterizedTest; +import org.junit.jupiter.params.provider.MethodSource; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.time.Instant; +import java.util.*; + +import static org.assertj.core.api.Assertions.assertThat; + +@ExtendWith(MockitoExtension.class) +class DefaultMtbServiceTest { + + private IOnkostarApi onkostarApi; + + private DefaultMtbService service; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.service = new DefaultMtbService(onkostarApi); + } + + private static Set<Map.Entry<String, Class<? extends ProcedureToProtocolMapper>>> expectedMappings() { + return Map.ofEntries( + Map.entry("OS.Tumorkonferenz", OsTumorkonferenzToProtocolMapper.class), + Map.entry("OS.Tumorkonferenz.VarianteUKW", OsTumorkonferenzVarianteUkwToProtocolMapper.class), + Map.entry("MR.MTB_Anmeldung", MrMtbAnmeldungToProtocolMapper.class) + ).entrySet(); + } + + @ParameterizedTest + @MethodSource("expectedMappings") + void testShouldMapFormNameToMapper(Map.Entry<String, Class<?>> expectedMapping) { + var procedure = new Procedure(onkostarApi); + procedure.setFormName(expectedMapping.getKey()); + + var actual = service.procedureToProtocolMapper(procedure); + + assertThat(actual).isExactlyInstanceOf(expectedMapping.getValue()); + } + + @Test + void testShouldReturnMtbProtocolForDefaultImplementation() { + var procedure1 = new Procedure(onkostarApi); + procedure1.setFormName("OS.Tumorkonferenz"); + procedure1.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure1.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + var procedures = List.of( + procedure1 + ); + + var actual = service.getProtocol(procedures); + + assertThat(actual).isEqualTo("Fragestellung:\nTest ok?\n\nEmpfehlung:\nRerun Test if not ok!"); + } + + @Test + void testShouldReturnMtbProtocolForMultipleTK() { + var procedure1 = new Procedure(onkostarApi); + procedure1.setFormName("OS.Tumorkonferenz"); + procedure1.setStartDate(Date.from(Instant.parse("2023-02-01T00:00:00Z"))); + procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test immer noch ok?")); + procedure1.setValue("Empfehlung", new Item("Empfehlung", "Do not rerun Test if ok!")); + + var procedure2 = new Procedure(onkostarApi); + procedure2.setFormName("OS.Tumorkonferenz"); + procedure2.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure2.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure2.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + var procedures = List.of( + procedure1, + procedure2 + ); + + var actual = service.getProtocol(procedures); + + assertThat(actual).isEqualTo( + "Fragestellung:\nTest ok?\n\nEmpfehlung:\nRerun Test if not ok!\n\n" + + "Fragestellung:\nTest immer noch ok?\n\nEmpfehlung:\nDo not rerun Test if ok!" + ); + } + + @Test + void testShouldReturnMtbProtocolForMultipleTKVarianteUKW() { + var procedure1 = new Procedure(onkostarApi); + procedure1.setFormName("OS.Tumorkonferenz.VarianteUKW"); + procedure1.setStartDate(Date.from(Instant.parse("2023-02-01T00:00:00Z"))); + procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test immer noch ok?")); + procedure1.setValue("Empfehlung", new Item("Empfehlung", "Do not rerun Test if ok!")); + + var procedure2 = new Procedure(onkostarApi); + procedure2.setFormName("OS.Tumorkonferenz.VarianteUKW"); + procedure2.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure2.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure2.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + + var procedures = Arrays.asList( + procedure1, + procedure2 + ); + + var actual = service.getProtocol(procedures); + + assertThat(actual).isEqualTo( + "Fragestellung:\nTest ok?\n\nEmpfehlung:\nRerun Test if not ok!\n\n" + + "Fragestellung:\nTest immer noch ok?\n\nEmpfehlung:\nDo not rerun Test if ok!" + ); + } + + @Test + void testShouldReturnDistinctProtocolEntries() { + var procedure1 = new Procedure(onkostarApi); + procedure1.setFormName("OS.Tumorkonferenz.VarianteUKW"); + procedure1.setStartDate(Date.from(Instant.parse("2023-02-01T00:00:00Z"))); + procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test immer noch ok?")); + procedure1.setValue("Empfehlung", new Item("Empfehlung", "Do not rerun Test if ok!")); + + var procedure2 = new Procedure(onkostarApi); + procedure2.setFormName("OS.Tumorkonferenz.VarianteUKW"); + procedure2.setStartDate(Date.from(Instant.parse("2023-02-01T00:00:00Z"))); + procedure2.setValue("Fragestellung", new Item("Fragestellung", "Test immer noch ok?")); + procedure2.setValue("Empfehlung", new Item("Empfehlung", "Do not rerun Test if ok!")); + + var procedure3 = new Procedure(onkostarApi); + procedure3.setFormName("OS.Tumorkonferenz.VarianteUKW"); + procedure3.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure3.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure3.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + + var procedures = Arrays.asList( + procedure1, + procedure2, + procedure3 + ); + + var actual = service.getProtocol(procedures); + + assertThat(actual).isEqualTo( + "Fragestellung:\nTest ok?\n\nEmpfehlung:\nRerun Test if not ok!\n\n" + + "Fragestellung:\nTest immer noch ok?\n\nEmpfehlung:\nDo not rerun Test if ok!" + ); + } + + @Test + void testShouldReturnEmptyMtbProtocolForUnknownForm() { + var procedure1 = new Procedure(onkostarApi); + procedure1.setFormName("OS.Tumorkonferenz.Unbekannt"); + procedure1.setStartDate(Date.from(Instant.parse("2023-02-01T00:00:00Z"))); + procedure1.setValue("Fragestellung", new Item("Fragestellung", "Test immer noch ok?")); + procedure1.setValue("Empfehlung", new Item("Empfehlung", "Do not rerun Test if ok!")); + + var procedure2 = new Procedure(onkostarApi); + procedure2.setFormName("OS.Tumorkonferenz.Unbekannt"); + procedure2.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure2.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure2.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + + var procedures = Arrays.asList( + procedure1, + procedure2 + ); + + var actual = service.getProtocol(procedures); + + assertThat(actual).isEmpty(); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/mtb/MrMtbAnmeldungToProtocolMapperTest.java b/src/test/java/dev/dnpm/oshelper/services/mtb/MrMtbAnmeldungToProtocolMapperTest.java new file mode 100644 index 0000000..86ac5d5 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/mtb/MrMtbAnmeldungToProtocolMapperTest.java @@ -0,0 +1,139 @@ +package dev.dnpm.oshelper.services.mtb; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.util.Set; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.ArgumentMatchers.anyInt; +import static org.mockito.Mockito.doAnswer; + +@ExtendWith(MockitoExtension.class) +class MrMtbAnmeldungToProtocolMapperTest { + + private IOnkostarApi onkostarApi; + + private MrMtbAnmeldungToProtocolMapper mapper; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.mapper = new MrMtbAnmeldungToProtocolMapper(onkostarApi); + } + + @Test + void testShouldMapCompletedForm() { + var anmeldung = new Procedure(onkostarApi); + anmeldung.setId(1); + anmeldung.setFormName("MR.MTB_Anmeldung"); + anmeldung.setValue("Fragestellung", new Item("Fragestellung", "Frage?")); + anmeldung.setValue("Empfehlung", new Item("Empfehlung", 2)); + + var empfehlung = new Procedure(onkostarApi); + empfehlung.setId(2); + empfehlung.setFormName("MR.MTB_Empfehlung"); + + var einzelempfehlung1 = new Procedure(onkostarApi); + einzelempfehlung1.setId(10); + einzelempfehlung1.setFormName("MR.MTB_Einzelempfehlung"); + einzelempfehlung1.setValue("Prioritaet", new Item("Empfehlungsprio", 1)); + einzelempfehlung1.setValue("Empfehlung", new Item("Empfehlung", "Empfehlung1")); + + var einzelempfehlung2 = new Procedure(onkostarApi); + einzelempfehlung2.setId(20); + einzelempfehlung2.setFormName("MR.MTB_Einzelempfehlung"); + einzelempfehlung2.setValue("Prioritaet", new Item("Empfehlungsprio", 2)); + einzelempfehlung2.setValue("Empfehlung", new Item("Empfehlung", "Empfehlung2")); + + doAnswer(invocationOnMock -> { + var procedureId = invocationOnMock.getArgument(0, Integer.class); + if (2 == procedureId) { + return empfehlung; + } else if (10 == procedureId) { + return einzelempfehlung1; + } else if (20 == procedureId) { + return einzelempfehlung2; + } + return null; + }).when(onkostarApi).getProcedure(anyInt()); + + doAnswer(invocationOnMock -> { + var procedureId = invocationOnMock.getArgument(0, Integer.class); + if (2 == procedureId) { + return Set.of(einzelempfehlung1, einzelempfehlung2); + } + return null; + }).when(onkostarApi).getSubprocedures(anyInt()); + + var actual = this.mapper.apply(anmeldung); + + assertThat(actual) + .isPresent() + .contains( + "Fragestellung:\nFrage?\n\n" + + "Empfehlung:\nEmpfehlung1\n\n" + + "Empfehlung:\nEmpfehlung2" + ); + } + + @Test + void testShouldMapFormWithMissingEinzelempfehlungen() { + var anmeldung = new Procedure(onkostarApi); + anmeldung.setId(1); + anmeldung.setFormName("MR.MTB_Anmeldung"); + anmeldung.setValue("Fragestellung", new Item("Fragestellung", "Frage?")); + anmeldung.setValue("Empfehlung", new Item("Empfehlung", 2)); + + var empfehlung = new Procedure(onkostarApi); + empfehlung.setId(2); + empfehlung.setFormName("MR.MTB_Empfehlung"); + + doAnswer(invocationOnMock -> { + var procedureId = invocationOnMock.getArgument(0, Integer.class); + if (2 == procedureId) { + return empfehlung; + } + return null; + }).when(onkostarApi).getProcedure(anyInt()); + + var actual = this.mapper.apply(anmeldung); + + assertThat(actual) + .isPresent() + .contains("Fragestellung:\nFrage?"); + } + + @Test + void testShouldMapFormWithMissingEmpfehlung() { + var anmeldung = new Procedure(onkostarApi); + anmeldung.setId(1); + anmeldung.setFormName("MR.MTB_Anmeldung"); + anmeldung.setValue("Fragestellung", new Item("Fragestellung", "Frage?")); + + var actual = this.mapper.apply(anmeldung); + + assertThat(actual) + .isPresent() + .contains("Fragestellung:\nFrage?"); + } + + @Test + void testShouldMapFormWithMissingFragestellungAndEmpfehlung() { + var anmeldung = new Procedure(onkostarApi); + anmeldung.setId(1); + anmeldung.setFormName("MR.MTB_Anmeldung"); + + var actual = this.mapper.apply(anmeldung); + + assertThat(actual).isEmpty(); + } +} diff --git a/src/test/java/dev/dnpm/oshelper/services/mtb/OsTumorkonferenzToProtocolMapperTest.java b/src/test/java/dev/dnpm/oshelper/services/mtb/OsTumorkonferenzToProtocolMapperTest.java new file mode 100644 index 0000000..c7fdfca --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/mtb/OsTumorkonferenzToProtocolMapperTest.java @@ -0,0 +1,47 @@ +package dev.dnpm.oshelper.services.mtb; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.time.Instant; +import java.util.Date; + +import static org.assertj.core.api.Assertions.assertThat; + +@ExtendWith(MockitoExtension.class) +class OsTumorkonferenzToProtocolMapperTest { + + private IOnkostarApi onkostarApi; + + private OsTumorkonferenzToProtocolMapper mapper; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.mapper = new OsTumorkonferenzToProtocolMapper(); + } + + @Test + void testShouldReturnMtbProtocolForDefaultImplementation() { + var procedure = new Procedure(onkostarApi); + procedure.setFormName("OS.Tumorkonferenz"); + procedure.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + var actual = mapper.apply(procedure); + + assertThat(actual) + .isPresent() + .contains("Fragestellung:\nTest ok?\n\nEmpfehlung:\nRerun Test if not ok!"); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapperTest.java b/src/test/java/dev/dnpm/oshelper/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapperTest.java new file mode 100644 index 0000000..316a012 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/mtb/OsTumorkonferenzVarianteUkwToProtocolMapperTest.java @@ -0,0 +1,47 @@ +package dev.dnpm.oshelper.services.mtb; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.time.Instant; +import java.util.Date; + +import static org.assertj.core.api.Assertions.assertThat; + +@ExtendWith(MockitoExtension.class) +class OsTumorkonferenzVarianteUkwToProtocolMapperTest { + + private IOnkostarApi onkostarApi; + + private OsTumorkonferenzVarianteUkwToProtocolMapper mapper; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.mapper = new OsTumorkonferenzVarianteUkwToProtocolMapper(); + } + + @Test + void testShouldReturnMtbProtocolForDefaultImplementation() { + var procedure = new Procedure(onkostarApi); + procedure.setFormName("OS.Tumorkonferenz.VarianteUKW"); + procedure.setStartDate(Date.from(Instant.parse("2023-01-01T00:00:00Z"))); + procedure.setValue("Fragestellung", new Item("Fragestellung", "Test ok?")); + procedure.setValue("Empfehlung", new Item("Empfehlung", "Rerun Test if not ok!")); + + var actual = mapper.apply(procedure); + + assertThat(actual) + .isPresent() + .contains("Fragestellung:\nTest ok?\n\nEmpfehlung:\nRerun Test if not ok!"); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/strahlentherapie/DefaultStrahlentherapieServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/strahlentherapie/DefaultStrahlentherapieServiceTest.java new file mode 100644 index 0000000..b490060 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/strahlentherapie/DefaultStrahlentherapieServiceTest.java @@ -0,0 +1,104 @@ +package dev.dnpm.oshelper.services.strahlentherapie; + +import dev.dnpm.oshelper.services.SettingsService; +import de.itc.onkostar.api.*; +import org.assertj.core.util.Lists; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.ArgumentCaptor; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.time.Instant; +import java.util.ArrayList; +import java.util.Date; +import java.util.List; +import java.util.Optional; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.*; + +@ExtendWith(MockitoExtension.class) +class DefaultStrahlentherapieServiceTest { + + private IOnkostarApi onkostarApi; + + private SettingsService settingsService; + + private DefaultStrahlentherapieService service; + + @BeforeEach + void setup(@Mock IOnkostarApi onkostarApi, @Mock SettingsService settingsService) { + this.onkostarApi = onkostarApi; + this.settingsService = settingsService; + this.service = new DefaultStrahlentherapieService(onkostarApi, settingsService); + } + + @Test + void testShouldRequestProceduresWithDefaultFormName() { + when(this.settingsService.getSetting(anyString())).thenReturn(Optional.empty()); + + doAnswer(invocationOnMock -> { + var procedure = new Procedure(onkostarApi); + procedure.setId(1); + procedure.setFormName("OS.Strahlentherapie"); + procedure.setStartDate(Date.from(Instant.parse("2023-07-01T06:00:00Z"))); + procedure.setEditState(ProcedureEditStateType.COMPLETED); + procedure.setValue("ECOGvorTherapie", new Item("ECOGvorTherapie", 1)); + return Lists.list(procedure); + }).when(this.onkostarApi).getProceduresForDiseaseByForm(anyInt(), anyString()); + + doAnswer(invocationOnMock -> { + var disease = new Disease(onkostarApi); + disease.setId(1); + disease.setPatientId(123); + return Lists.list(disease); + }).when(this.onkostarApi).getDiseasesByPatientId(anyInt()); + + var patient = new Patient(onkostarApi); + patient.setId(123); + + service.ecogStatus(patient); + + var argumentCaptor = ArgumentCaptor.forClass(String.class); + verify(onkostarApi, times(1)).getProceduresForDiseaseByForm(anyInt(), argumentCaptor.capture()); + assertThat(argumentCaptor.getValue()).isEqualTo("OS.Strahlentherapie"); + } + + @Test + void testShouldReturnListOfEcogStatusWithDate() { + doAnswer(invocationOnMock -> { + var disease = new Disease(onkostarApi); + disease.setId(1); + return List.of(disease); + }).when(this.onkostarApi).getDiseasesByPatientId(anyInt()); + + doAnswer(invocationOnMock -> { + var procedure1 = new Procedure(onkostarApi); + procedure1.setId(1); + procedure1.setFormName("OS.Strahlentherapie"); + procedure1.setStartDate(Date.from(Instant.parse("2023-07-01T06:00:00Z"))); + procedure1.setEditState(ProcedureEditStateType.COMPLETED); + procedure1.setValue("ECOGvorTherapie", new Item("ECOGvorTherapie", 1)); + + var procedure2 = new Procedure(onkostarApi); + procedure2.setId(2); + procedure2.setFormName("OS.Strahlentherapie"); + procedure2.setStartDate(Date.from(Instant.parse("2023-07-12T06:00:00Z"))); + procedure2.setEditState(ProcedureEditStateType.COMPLETED); + procedure2.setValue("ECOGvorTherapie", new Item("ECOGvorTherapie", 2)); + return List.of(procedure1, procedure2); + }).when(this.onkostarApi).getProceduresForDiseaseByForm(anyInt(), anyString()); + + var patient = new Patient(onkostarApi); + patient.setId(1); + + var actual = service.ecogStatus(patient); + + assertThat(actual) + .isNotNull() + .isExactlyInstanceOf(ArrayList.class) + .hasSize(2); + } +} diff --git a/src/test/java/dev/dnpm/oshelper/services/systemtherapie/DefaultSystemtherapieServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/systemtherapie/DefaultSystemtherapieServiceTest.java new file mode 100644 index 0000000..b60a678 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/systemtherapie/DefaultSystemtherapieServiceTest.java @@ -0,0 +1,131 @@ +package dev.dnpm.oshelper.services.systemtherapie; + +import dev.dnpm.oshelper.services.SettingsService; +import de.itc.onkostar.api.*; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.junit.jupiter.params.ParameterizedTest; +import org.junit.jupiter.params.provider.MethodSource; +import org.mockito.ArgumentCaptor; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.time.Instant; +import java.util.*; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.*; + +@ExtendWith(MockitoExtension.class) +class DefaultSystemtherapieServiceTest { + + private IOnkostarApi onkostarApi; + + private SettingsService settingsService; + + private DefaultSystemtherapieService service; + + @BeforeEach + void setup(@Mock IOnkostarApi onkostarApi, @Mock SettingsService settingsService) { + this.onkostarApi = onkostarApi; + this.settingsService = settingsService; + this.service = new DefaultSystemtherapieService(onkostarApi, settingsService); + } + + private static Set<Map.Entry<String, Class<OsSystemischeTherapieToProzedurwerteMapper>>> expectedMapperMappings() { + return Map.ofEntries(Map.entry("OS.Systemische Therapie", OsSystemischeTherapieToProzedurwerteMapper.class), Map.entry("OS.Systemische Therapie.VarianteUKW", OsSystemischeTherapieToProzedurwerteMapper.class)).entrySet(); + } + + @ParameterizedTest + @MethodSource("expectedMapperMappings") + void testShouldMapFormNameToMapper(Map.Entry<String, Class<?>> expectedMapping) { + var procedure = new Procedure(onkostarApi); + procedure.setFormName(expectedMapping.getKey()); + + var actual = service.prozedurToProzedurwerteMapper(procedure); + + assertThat(actual).isExactlyInstanceOf(expectedMapping.getValue()); + } + + private static List<String> formnameSetting() { + return List.of("OS.Systemische Therapie", "OS.Systemische Therapie.VarianteUKW"); + } + + @ParameterizedTest + @MethodSource("formnameSetting") + void testShouldRequestProceduresWithExpectedFormName(String expectedFormName) { + when(this.settingsService.getSetting(anyString())).thenReturn(Optional.of(expectedFormName)); + when(this.onkostarApi.getProceduresForDiseaseByForm(anyInt(), anyString())).thenReturn(List.of()); + + service.getSystemischeTherapienFromDiagnose(123); + + var argumentCaptor = ArgumentCaptor.forClass(String.class); + verify(onkostarApi, times(1)).getProceduresForDiseaseByForm(anyInt(), argumentCaptor.capture()); + assertThat(argumentCaptor.getValue()).isEqualTo(expectedFormName); + } + + @Test + void testShouldRequestProceduresWithDefaultFormName() { + when(this.settingsService.getSetting(anyString())).thenReturn(Optional.empty()); + when(this.onkostarApi.getProceduresForDiseaseByForm(anyInt(), anyString())).thenReturn(List.of()); + + service.getSystemischeTherapienFromDiagnose(123); + + var argumentCaptor = ArgumentCaptor.forClass(String.class); + verify(onkostarApi, times(1)).getProceduresForDiseaseByForm(anyInt(), argumentCaptor.capture()); + assertThat(argumentCaptor.getValue()).isEqualTo("OS.Systemische Therapie"); + } + + @Test + void testShouldReturnSystemischeTherapienFromDiagnose() { + doAnswer(invocationOnMock -> { + var procedure = new Procedure(onkostarApi); + procedure.setFormName("OS.Systemische Therapie"); + return List.of(procedure); + }).when(this.onkostarApi).getProceduresForDiseaseByForm(anyInt(), anyString()); + + var actual = service.getSystemischeTherapienFromDiagnose(1); + + assertThat(actual) + .isNotNull() + .isExactlyInstanceOf(ArrayList.class) + .hasSize(1); + } + + @Test + void testShouldReturnListOfEcogStatusWithDate() { + doAnswer(invocationOnMock -> { + var disease = new Disease(onkostarApi); + disease.setId(1); + return List.of(disease); + }).when(this.onkostarApi).getDiseasesByPatientId(anyInt()); + + doAnswer(invocationOnMock -> { + var procedure1 = new Procedure(onkostarApi); + procedure1.setId(1); + procedure1.setFormName("OS.Systemische Therapie"); + procedure1.setStartDate(Date.from(Instant.parse("2023-07-01T06:00:00Z"))); + procedure1.setEditState(ProcedureEditStateType.COMPLETED); + procedure1.setValue("ECOGvorTherapie", new Item("ECOGvorTherapie", 1)); + + var procedure2 = new Procedure(onkostarApi); + procedure2.setId(2); + procedure2.setFormName("OS.Systemische Therapie"); + procedure2.setStartDate(Date.from(Instant.parse("2023-07-12T06:00:00Z"))); + procedure2.setEditState(ProcedureEditStateType.COMPLETED); + procedure2.setValue("ECOGvorTherapie", new Item("ECOGvorTherapie", 2)); + return List.of(procedure1, procedure2); + }).when(this.onkostarApi).getProceduresForDiseaseByForm(anyInt(), anyString()); + + var patient = new Patient(onkostarApi); + patient.setId(1); + + var actual = service.ecogStatus(patient); + + assertThat(actual) + .isNotNull() + .isExactlyInstanceOf(ArrayList.class) + .hasSize(2); + } +} diff --git a/src/test/java/dev/dnpm/oshelper/services/systemtherapie/ProzedurToProzedurwerteMapperTest.java b/src/test/java/dev/dnpm/oshelper/services/systemtherapie/ProzedurToProzedurwerteMapperTest.java new file mode 100644 index 0000000..edb876b --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/systemtherapie/ProzedurToProzedurwerteMapperTest.java @@ -0,0 +1,71 @@ +package dev.dnpm.oshelper.services.systemtherapie; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.sql.Date; +import java.time.Instant; +import java.util.ArrayList; +import java.util.Map; + +import static org.assertj.core.api.Assertions.assertThat; + +@ExtendWith(MockitoExtension.class) +class ProzedurToProzedurwerteMapperTest { + + private IOnkostarApi onkostarApi; + + private OsSystemischeTherapieToProzedurwerteMapper mapper; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi + ) { + this.onkostarApi = onkostarApi; + this.mapper = new OsSystemischeTherapieToProzedurwerteMapper(); + } + + @Test + void testShouldReturnSystemischeTherapienFromDiagnose() { + var procedure = new Procedure(onkostarApi); + procedure.setFormName("OS.Systemische Therapie"); + procedure.setValue("Beginn", new Item("Beginn", Date.from(Instant.parse("2023-01-01T00:00:00Z")))); + procedure.setValue("Ende", new Item("Ende", Date.from(Instant.parse("2023-01-31T00:00:00Z")))); + procedure.setValue("Beendigung", new Item("Beendigungsstatus", "E")); + procedure.setValue("Ergebnis", new Item("Ergebnis", "T")); + + var substanzen = new ArrayList<>(); + substanzen.add(Map.of( + "Substanz", "Testsubstanz", + "Substanz_shortDescription", "Testsubstanz" + )); + substanzen.add(Map.of( + "Substanz", "L01AA01", + "Substanz_shortDescription", "cyclophosphamide" + )); + procedure.setValue("SubstanzenList", new Item("SubstanzenList", substanzen)); + + var actual = mapper.apply(procedure); + + assertThat(actual).isPresent(); + + assertThat(actual.get()).containsEntry("Beginn", Date.from(Instant.parse("2023-01-01T00:00:00Z")).toString()); + assertThat(actual.get()).containsEntry("Ende", Date.from(Instant.parse("2023-01-31T00:00:00Z")).toString()); + assertThat(actual.get()).containsEntry("Beendigung", "E"); + assertThat(actual.get()).containsEntry("Ergebnis", "T"); + assertThat(actual.get()).containsEntry("Wirkstoffe", "Testsubstanz, cyclophosphamide"); + assertThat(actual.get()).containsEntry("WirkstoffCodes", + "[" + + "{\"system\":\"other\",\"code\":\"Testsubstanz\",\"substance\":\"Testsubstanz\"}," + + "{\"system\":\"ATC\",\"code\":\"L01AA01\",\"substance\":\"cyclophosphamide\"}" + + "]" + ); + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/therapieplan/DefaultTherapieplanServiceTest.java b/src/test/java/dev/dnpm/oshelper/services/therapieplan/DefaultTherapieplanServiceTest.java new file mode 100644 index 0000000..79869e2 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/therapieplan/DefaultTherapieplanServiceTest.java @@ -0,0 +1,169 @@ +package dev.dnpm.oshelper.services.therapieplan; + +import de.itc.onkostar.api.IOnkostarApi; +import de.itc.onkostar.api.Item; +import de.itc.onkostar.api.Procedure; +import de.itc.onkostar.api.constants.JaNeinUnbekannt; +import dev.dnpm.oshelper.services.FormService; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.ArgumentCaptor; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import java.time.Instant; +import java.util.Date; +import java.util.List; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.*; + +@ExtendWith(MockitoExtension.class) +class DefaultTherapieplanServiceTest { + + private IOnkostarApi onkostarApi; + + private TherapieplanService service; + + @BeforeEach + void setUp( + @Mock IOnkostarApi onkostarApi, + @Mock FormService formService + ) { + this.onkostarApi = onkostarApi; + this.service = new DefaultTherapieplanService(onkostarApi, formService); + } + + @Test + void shouldNotUpdateSubformsOrSectionsIfMultipleMtbConfiguration() throws Exception { + this.service.updateRequiredMtbEntries(new Procedure(onkostarApi)); + verify(onkostarApi, never()).saveProcedure(any(Procedure.class), anyBoolean()); + } + + @Test + void shouldNotUpdateSectionsIfSectionsNotEnabled() throws Exception { + var testProcedure = baseProcedure(onkostarApi); + + // Keine humangenetische Beratung und keine Reevaluation empfohlen + testProcedure.setValue("humangenberatung", new Item("humangen_beratung", JaNeinUnbekannt.NEIN.getCode())); + testProcedure.setValue("reevaluation", new Item("reevaluation", JaNeinUnbekannt.NEIN.getCode())); + + this.service.updateRequiredMtbEntries(testProcedure); + + verify(onkostarApi, never()).saveProcedure(any(Procedure.class), anyBoolean()); + } + + @Test + void shouldUpdateSectionsIfNoReevaluation() throws Exception { + var testProcedure = baseProcedure(onkostarApi); + + // Humangenetische Beratung aber keine Reevaluation + testProcedure.setValue("humangenberatung", new Item("humangen_beratung", JaNeinUnbekannt.JA.getCode())); + testProcedure.setValue("humangenberbegruendung", new Item("humangen_ber_begruendung", "Das ist die Begründung")); + testProcedure.setValue("reevaluation", new Item("reevaluation", JaNeinUnbekannt.NEIN.getCode())); + + this.service.updateRequiredMtbEntries(testProcedure); + + var captor = ArgumentCaptor.forClass(Procedure.class); + verify(onkostarApi, times(1)).saveProcedure(captor.capture(), anyBoolean()); + + var capturedProcedure = captor.getValue(); + + assertThat(capturedProcedure.getValue("reftkreevaluation")).isNull(); + assertThat(capturedProcedure.getValue("datumtkreevaluation")).isNull(); + + assertThat(capturedProcedure.getValue("reftkhumangenber")).isNotNull(); + assertThat(capturedProcedure.getValue("reftkhumangenber").getInt()).isEqualTo(procedureId); + assertThat(capturedProcedure.getValue("datumtkhumangenber")).isNotNull(); + assertThat(capturedProcedure.getValue("datumtkhumangenber").getDate()).isEqualTo(testDate); + } + + @Test + void shouldUpdateSectionsIfNoHumanGenConsultation() throws Exception { + var testProcedure = baseProcedure(onkostarApi); + + // Humangenetische Beratung aber keine Reevaluation + testProcedure.setValue("humangenberatung", new Item("humangen_beratung", JaNeinUnbekannt.NEIN.getCode())); + testProcedure.setValue("reevaluation", new Item("reevaluation", JaNeinUnbekannt.JA.getCode())); + + this.service.updateRequiredMtbEntries(testProcedure); + + var captor = ArgumentCaptor.forClass(Procedure.class); + verify(onkostarApi, times(1)).saveProcedure(captor.capture(), anyBoolean()); + + var capturedProcedure = captor.getValue(); + + assertThat(capturedProcedure.getValue("reftkhumangenber")).isNull(); + assertThat(capturedProcedure.getValue("datumtkhumangenber")).isNull(); + + assertThat(capturedProcedure.getValue("reftkreevaluation")).isNotNull(); + assertThat(capturedProcedure.getValue("reftkreevaluation").getInt()).isEqualTo(procedureId); + assertThat(capturedProcedure.getValue("datumtkreevaluation")).isNotNull(); + assertThat(capturedProcedure.getValue("datumtkreevaluation").getDate()).isEqualTo(testDate); + } + + @Test + void shouldFindFollowUps() { + doAnswer(invocationOnMock -> { + var testProcedure = baseProcedure(onkostarApi); + testProcedure.setId(procedureId); + testProcedure.setFormName("DNPM UF Einzelempfehlung"); + testProcedure.addDiseaseId(123); + return testProcedure; + }).when(onkostarApi).getProcedure(anyInt()); + + doAnswer(invocationOnMock -> { + var diseaseId = invocationOnMock.getArgument(0, Integer.class); + var formName = invocationOnMock.getArgument(1, String.class); + var procedure = baseProcedure(onkostarApi); + procedure.addDiseaseId(diseaseId); + procedure.setFormName(formName); + procedure.setValue("LinkTherapieempfehlung", new Item("LinkTherapieempfehlung", procedureId)); + return List.of(procedure); + }).when(onkostarApi).getProceduresForDiseaseByForm(anyInt(), anyString()); + + var followUps = this.service.findReferencedFollowUpsForSubform(1); + + assertThat(followUps).hasSize(1) + .allSatisfy(procedure -> assertThat(procedure.getFormName()).isEqualTo("DNPM FollowUp")); + } + + @Test + void shouldFindFollowUpsById() { + var testProcedure = baseProcedure(onkostarApi); + testProcedure.setId(procedureId); + testProcedure.setFormName("DNPM UF Einzelempfehlung"); + testProcedure.addDiseaseId(123); + + doAnswer(invocationOnMock -> { + var diseaseId = invocationOnMock.getArgument(0, Integer.class); + var formName = invocationOnMock.getArgument(1, String.class); + var procedure = baseProcedure(onkostarApi); + procedure.addDiseaseId(diseaseId); + procedure.setFormName(formName); + procedure.setValue("LinkTherapieempfehlung", new Item("LinkTherapieempfehlung", procedureId)); + return List.of(procedure); + }).when(onkostarApi).getProceduresForDiseaseByForm(anyInt(), anyString()); + + var followUps = this.service.findReferencedFollowUpsForSubform(testProcedure); + + assertThat(followUps).hasSize(1) + .allSatisfy(procedure -> assertThat(procedure.getFormName()).isEqualTo("DNPM FollowUp")); + } + + private static final int procedureId = 1234; + private static final Date testDate = Date.from(Instant.parse("2023-03-15T09:43:00Z")); + + private Procedure baseProcedure(final IOnkostarApi onkostarApi) { + var testProcedure = new Procedure(onkostarApi); + testProcedure.setId(1000); + + // Setzen MTB Referenz und Datum MTB + testProcedure.setValue("referstemtb", new Item("ref_tumorkonferenz", procedureId)); + testProcedure.setValue("datum", new Item("datum", testDate)); + + return testProcedure; + } + +} diff --git a/src/test/java/dev/dnpm/oshelper/services/therapieplan/TherapieplanServiceFactoryTest.java b/src/test/java/dev/dnpm/oshelper/services/therapieplan/TherapieplanServiceFactoryTest.java new file mode 100644 index 0000000..9b526e2 --- /dev/null +++ b/src/test/java/dev/dnpm/oshelper/services/therapieplan/TherapieplanServiceFactoryTest.java @@ -0,0 +1,49 @@ +package dev.dnpm.oshelper.services.therapieplan; + +import de.itc.onkostar.api.IOnkostarApi; +import dev.dnpm.oshelper.services.FormService; +import dev.dnpm.oshelper.services.SettingsService; +import org.junit.jupiter.api.BeforeEach; +import org.junit.jupiter.api.Test; +import org.junit.jupiter.api.extension.ExtendWith; +import org.mockito.Mock; +import org.mockito.junit.jupiter.MockitoExtension; + +import static org.assertj.core.api.Assertions.assertThat; +import static org.mockito.Mockito.when; + +@ExtendWith(MockitoExtension.class) +class TherapieplanServiceFactoryTest { + + private SettingsService settingsService; + + private TherapieplanServiceFactory therapieplanServiceFactory; + + @BeforeEach + void setup( + @Mock IOnkostarApi onkostarApi, + @Mock SettingsService settingsService, + @Mock FormService formService + ) { + this.settingsService = settingsService; + this.therapieplanServiceFactory = new TherapieplanServiceFactory(onkostarApi, settingsService, formService); + } + + @Test + void testShouldReturnDefaultTherapieplanServiceIfSettingIsFalse() { + when(settingsService.multipleMtbsInMtbEpisode()).thenReturn(false); + + var actual = this.therapieplanServiceFactory.currentUsableInstance(); + + assertThat(actual).isInstanceOf(DefaultTherapieplanService.class); + } + + @Test + void testShouldReturnMultipleMtbTherapieplanServiceIfSettingIsTrue() { + when(settingsService.multipleMtbsInMtbEpisode()).thenReturn(true); + + var actual = this.therapieplanServiceFactory.currentUsableInstance(); + + assertThat(actual).isInstanceOf(MultipleMtbTherapieplanService.class); + } +} |