diff options
| author | Paul-Christian Volkmer | 2025-10-23 11:08:10 +0200 |
|---|---|---|
| committer | Paul-Christian Volkmer | 2025-10-23 11:09:54 +0200 |
| commit | 84fb0d829832bf1628112376bba729422b169402 (patch) | |
| tree | 4828674b77105877dccfcccb380da3f7c0f75987 /src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java | |
| parent | 61e7dfcbe637f401f81ff853e9bd10c90b325acb (diff) | |
refactor: change package name
Diffstat (limited to 'src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java')
| -rw-r--r-- | src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java | 158 |
1 files changed, 0 insertions, 158 deletions
diff --git a/src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java b/src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java deleted file mode 100644 index 876c7a0..0000000 --- a/src/main/java/dev/dnpm/analyzer/EinzelempfehlungAnalyzer.java +++ /dev/null @@ -1,158 +0,0 @@ -/* - * This file is part of onkostar-plugin-dnpm - * - * Copyright (c) 2025 the original author or authors. - * - * Permission is hereby granted, free of charge, to any person obtaining a copy - * of this software and associated documentation files (the "Software"), to deal - * in the Software without restriction, including without limitation the rights - * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell - * copies of the Software, and to permit persons to whom the Software is - * furnished to do so, subject to the following conditions: - * - * The above copyright notice and this permission notice shall be included in all - * copies or substantial portions of the Software. - * - * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR - * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, - * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE - * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER - * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, - * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE - * SOFTWARE. - */ - -package dev.dnpm.analyzer; - -import dev.dnpm.dto.Studie; -import dev.dnpm.dto.Variant; -import dev.dnpm.security.PermissionType; -import dev.dnpm.security.PersonPoolBasedPermissionEvaluator; -import dev.dnpm.services.StudienService; -import dev.dnpm.services.molekulargenetik.MolekulargenetikFormService; -import de.itc.onkostar.api.Disease; -import de.itc.onkostar.api.IOnkostarApi; -import de.itc.onkostar.api.Procedure; -import de.itc.onkostar.api.analysis.AnalyzerRequirement; -import org.slf4j.Logger; -import org.slf4j.LoggerFactory; -import org.springframework.security.core.context.SecurityContextHolder; -import org.springframework.stereotype.Component; - -import java.util.List; -import java.util.Map; - -/** - * Diese Klasse implementiert ein Plugin, welches Funktionen für DNPM UF Einzelempfehlung bereitstellt. - * - * @since 0.2.0 - */ -@Component -public class EinzelempfehlungAnalyzer extends BackendService { - - private final static Logger logger = LoggerFactory.getLogger(EinzelempfehlungAnalyzer.class); - - private final IOnkostarApi onkostarApi; - - private final MolekulargenetikFormService molekulargenetikFormService; - - private final StudienService studienService; - - private final PersonPoolBasedPermissionEvaluator permissionEvaluator; - - public EinzelempfehlungAnalyzer( - final IOnkostarApi onkostarApi, - final StudienService studienService, - final MolekulargenetikFormService molekulargenetikFormService, - final PersonPoolBasedPermissionEvaluator permissionEvaluator - ) { - this.onkostarApi = onkostarApi; - this.studienService = studienService; - this.molekulargenetikFormService = molekulargenetikFormService; - this.permissionEvaluator = permissionEvaluator; - } - - @Override - public String getDescription() { - return "Stellt Funktionen zur Nutzung im Therapieplan-Unterformular für Einzelempfehlungen bereit"; - } - - /** - * @deprecated - */ - @Override - public boolean isRelevantForDeletedProcedure() { - return false; - } - - @Override - public boolean isRelevantForAnalyzer(Procedure procedure, Disease disease) { - return false; - } - - @Override - public boolean isSynchronous() { - return false; - } - - @Override - public AnalyzerRequirement getRequirement() { - return AnalyzerRequirement.PROCEDURE; - } - - public List<Variant> getVariants(Map<String, Object> input) { - var procedureId = AnalyzerUtils.getRequiredId(input, "id"); - - if (procedureId.isEmpty()) { - return List.of(); - } - - var procedure = onkostarApi.getProcedure(procedureId.get()); - if (null == procedure) { - return List.of(); - } - - if (permissionEvaluator.hasPermission(SecurityContextHolder.getContext().getAuthentication(), procedure, PermissionType.READ)) { - return molekulargenetikFormService.getVariants(procedure); - } else { - logger.error("Security: No permission to access procedure '{}'", procedure.getId()); - return List.of(); - } - } - - /** - * Übergibt alle Studien, deren (Kurz-)Beschreibung oder NCT-Nummer den übergebenen Eingabewert <code>q</code> enthält - * - * <p>Wurde der Eingabewert nicht angegeben oder ist leer, werden alle Studien übergeben. - * - * <p>Beispiel zur Nutzung in einem Formularscript - * <pre> - * executePluginMethod( - * 'TherapieplanAnalyzer', - * 'getStudien', - * { q: 'NCT-12', inactive: true }, - * (response) => console.log(response), - * false - * ); - * </pre> - * - * @param input Map mit Eingabewerten - * @return Liste mit Studien - */ - public List<Studie> getStudien(Map<String, Object> input) { - var query = AnalyzerUtils.getRequiredValue(input, "q", String.class); - var inactive = AnalyzerUtils.getRequiredValue(input, "inactive", Boolean.class).orElse(false); - - if (query.isEmpty() || query.get().isBlank()) { - if (inactive) { - return studienService.findAll(); - } - return studienService.findActive(); - } - if (inactive) { - return studienService.findByQuery(query.get()); - } - return studienService.findActiveByQuery(query.get()); - } - -} |
